Phoenix dactylifera (date palm): 103705413
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Entry
103705413 CDS
T03274
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103705413
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103705413
03110 Chaperones and folding catalysts [BR:
pda03110
]
103705413
03029 Mitochondrial biogenesis [BR:
pda03029
]
103705413
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103705413
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103705413
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103705413
Chaperones and folding catalysts [BR:
pda03110
]
Heat shock proteins
HSP60 / Chaperonin
103705413
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103705413
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103705413
Exosomal proteins of other body fluids (saliva and urine)
103705413
Exosomal proteins of breast cancer cells
103705413
Exosomal proteins of colorectal cancer cells
103705413
Exosomal proteins of bladder cancer cells
103705413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103705413
NCBI-ProteinID:
XP_038982684
UniProt:
A0A8B9AHD4
LinkDB
All DBs
Position
5:9058531..9063880
Genome browser
AA seq
583 aa
AA seq
DB search
MASANAISTASFLRSSHRQQESLWRRASPGQRPSGKRQLVVRAVAKDIAFDQNSRSSLQA
GVEKLANAVGVTLGPRGRNVVLDEFGNPRVVNDGVTIARAIELADPMENAGAALIREVAS
KTNDSAGDGTTTASVLAQEIINLGLLSVTSGGNPVSIKKGIDKTVQGLVEELEKRARPVK
GHGDVKAIASISSGNDEFVGSMIADAIDKVGPDGVLSIESSSSFETTIDVEEGMEIDRGY
VSPQFVTNPEKLLVEFENAKVLVTDQKISTIKEIIPLLEKTTQLRAPLLIIAEDVTGEAL
ATLVVNKLRGILNVAAIKAPSFGERRKALLQDIAIVTGAEFQAKDLGLLVENASVEQLGT
ARKVTISQNSTTIIADAATKDEIQARIAQIKKELAETDSIYDSEKLAERIAKLSGGVAVV
KVGAATETELEDRNLRIEDAKNATFAAIEEGIVPGGGAAYVHLSTCVPAIKDKLEDADER
LGADIVQKALVAPAALIAHNAGVEGEVVVEKIKDSEWEVGYNAMIDKYENLLEAGVIDPA
KVARCALQNASSVAGMVLTTQAIVVEKPKPKAPVAAQPEGLTI
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagccaacgcaatctccaccgcctccttcctccgctcctcccatcgccagcag
gagagcctgtggaggagagcaagcccggggcagaggcccagcggcaaacggcagctcgtc
gtgcgggcggtggccaaagacatcgccttcgaccagaactccagaagctctctccaagcc
ggcgtggagaagctcgctaatgctgtcggagtcaccctcggccctagagggaggaatgtc
gtgttggatgagtttgggaaccccagagtggttaatgatggggtcaccatcgctcgggct
attgagctcgcagatcctatggagaatgctggtgcagcgttgattcgtgaggttgctagc
aagacaaatgactctgctggtgatggtactacgaccgcatcagttcttgcacaagaaatc
attaacttgggtctgctgagtgttacgtctggtggaaatcctgtgtccatcaagaaggga
atcgacaagactgtacaggggctggtggaagagcttgagaagagagctcgccctgttaag
ggacatggagatgtaaaagctattgcttctatctcatctggtaatgatgagtttgtggga
agcatgattgctgatgctattgataaggtcggccccgatggtgttctttctatcgagtct
tcatcatcctttgagactactattgatgttgaagaaggaatggagattgaccgaggttat
gtctccccacaatttgtcacaaatcctgagaagttactagttgaatttgagaatgccaaa
gttctagtaactgaccagaagatttcaacaattaaagaaataatccctttgttggagaaa
accacacaactgagagctccgcttctcatcattgctgaggatgtaactggtgaggctttg
gcaactcttgttgtgaataagctgcggggtatacttaatgttgctgcaatcaaggctcct
agttttggtgagaggcggaaggctcttcttcaagatattgccattgtgacaggagctgag
tttcaagccaaagatcttggattattggtagaaaatgcatctgtggagcagcttggcact
gcaaggaaggttaccatctctcaaaactctaccaccattattgcagatgcagcaaccaag
gatgagatacaggcgagaattgcccagataaagaaggagcttgcagagacagactctatt
tacgattctgagaagctagcggagaggattgcaaaactctctggtggtgtggcagttgtc
aaggtcggtgctgcaacagagacagagcttgaagaccgcaacctcagaattgaggatgcc
aagaatgctactttcgcagctatagaggaaggaattgttcctggaggtggtgctgcctat
gttcatctctctacctgtgttcctgccataaaggataagcttgaagatgcagatgagcgc
cttggtgctgacattgtgcaaaaagcactggtggcacctgctgccttgatagcacataat
gcgggtgtggagggagaagtggtggtggagaagattaaggacagtgagtgggaggttggt
tacaatgcgatgattgacaagtatgagaatctgttagaagctggtgtcatcgaccctgca
aaagttgctcgatgtgcattgcagaatgcttcatcagttgctggaatggtcctaacaaca
caggctattgttgtggagaagcccaaaccaaaggcaccggtggctgcacaacctgagggt
cttaccatctaa
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