Phoenix dactylifera (date palm): 103706169
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Entry
103706169 CDS
T03274
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 28
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103706169
03009 Ribosome biogenesis [BR:
pda03009
]
103706169
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103706169
Spliceosome [BR:
pda03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103706169
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Helicases
103706169
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
103706169
NCBI-ProteinID:
XP_008788426
UniProt:
A0A8B7BZA7
LinkDB
All DBs
Position
2:3762382..3788491
Genome browser
AA seq
736 aa
AA seq
DB search
MDPDFHFDAVSSDEETVAVEEGAKKQSPWEFSSFSVSVADEHVRRRTTSVDAKISKALQQ
RPVSLPDDEDDDDEEEPKEEEEVLSADESTKKENHKSRKPDGKNTSGGAGAFFASSEGAS
FHANSFIELNLSRPLLRACEALGYHKPTPIQAACIPLALTGRDICGSAITGSGKTAAFTL
PVLERLLFRPKRVSAIRVLILTPTRELAAQVHSMIEKLAQFTDVRCCLVVGGLPTKMQEA
ALRSMPDIVVATPGRIIDHLWNSVSVGLEDLAVLILDEADRLLELGFSAEIHELIRLCPK
RRQTLLFSATMTEEVDQLVKLSLNKPVRLQADPSARRPATLTEEVVRIRRMREVNQEAVL
LALCSKTFMQKVIIFSGTKQAAHRLKIIFGLAGMKAAELHGNLTQAQRLDALELFRRQEV
DFLIATDVAARGLDIVGVQTVINFACPRDDKSYVHRVGRTARAGREGYAVTFVTDDDRSL
LKAIAKKAGSKLKSRIVAEKSIAEWSQLIEQMEDQISTVLQEEREERALRKAEMEATKAE
NMIAHKEEIFSRPKRTWFATEKEKKLLAKAAKESLEKNQNGQKEVISAQQAEELKLKEKR
KREREKNLPRKKRRRLEAAREILENEEEDNNEDQETGGGKKGKTGISLVDVAYRRAKSVK
AIQKAHEGGKILKNSGKRANQPSQKNQTRKEEMLELFHNDMGERKQSHTSKRSNNASSRR
KSKSSFKSKSRYKRRK
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatcccgacttccacttcgacgcggtgagctcggacgaggagaccgtcgcggtcgag
gaaggggcgaaaaagcagtcgccgtgggagttctcttccttctcggtgtccgtagccgat
gagcatgtccggaggagaaccacctccgttgacgccaagatctccaaggctctccagcaa
cgccccgtctcgcttcccgacgacgaagatgatgacgacgaggaagagcccaaggaggag
gaggaggtcctctccgctgatgagtccaccaagaaagaaaatcataaatctcgaaagcct
gatggcaaaaatactagcggaggggcaggtgctttttttgcatcatccgaaggagcatca
ttccatgcaaattcttttatcgagctgaacttatctcgccctttacttagagcttgtgaa
gcattgggataccataagccaacaccaattcaggctgcatgcataccgttagcattaact
ggccgtgatatatgtggtagcgccataacaggctctggaaagacagctgcattcacctta
cctgtgctggagcgtttgcttttccggcccaagcgtgtctctgcaatcagggtgcttatt
cttactccaaccagagagctagctgcacaggtccatagtatgatagagaaacttgctcaa
tttactgatgtcagatgctgccttgttgttggcgggcttccaacgaagatgcaagaggca
gccttgagatcaatgcctgatattgttgtagctactcctgggagaataatagatcatcta
tggaattcagtttcagttgggcttgaagatcttgctgttttgatccttgatgaggcagac
cgtcttctagagttgggtttcagtgctgaaattcatgaactgattcgcttgtgccctaaa
cggagacaaaccttgctattttctgctactatgactgaagaagttgatcagcttgtcaag
ctttcactaaataaacctgtacgccttcaggctgatccctctgcgaggcgaccagctaca
ttgactgaggaggtagttagaatacgacgtatgcgtgaagtaaatcaggaagcggttctt
cttgcactatgttctaagaccttcatgcagaaagtgatcattttcagtggaactaaacag
gctgcacataggttaaaaataatattcggcctggctggaatgaaagctgctgaacttcat
ggtaatctaactcaagcacaacgccttgatgctttggaactatttagaaggcaagaagtg
gattttctaattgcaactgatgttgctgctcgtgggcttgacattgttggtgttcaaact
gtaattaattttgcatgccctcgtgatgataaaagctatgttcatcgggttggtcgtaca
gctagagctgggagagaaggatatgctgttacatttgtgaccgatgatgatcgttctctc
ttgaaggccattgcaaagaaggctggttcaaaattaaagagtcgaattgttgctgaaaag
tcaatagctgaatggtctcaattaattgaacaaatggaagatcaaatttcaacagttctt
caagaagaaagggaggaaagagcattgaggaaagcggaaatggaagcaacaaaggcagaa
aatatgatcgcacataaggaagaaattttttcacgccctaaaagaacttggtttgcaact
gaaaaggagaagaaacttctagctaaggctgcaaaagaatccttggaaaaaaatcaaaat
ggtcaaaaggaagtaataagtgctcagcaagcagaagaattgaaattgaaggagaagaga
aaaagagagcgtgagaaaaatctgccacgtaagaaacgtcgaagactggaagcagctcgg
gagattttagagaatgaagaggaagataacaatgaagatcaggaaaccggaggcggcaag
aaagggaaaacagggatatcgcttgttgatgtagcttaccgccgagcaaaatcagtgaaa
gctattcagaaggcacatgaaggtgggaagatattgaaaaattctggcaaaagggcaaac
caaccttctcaaaaaaatcaaaccagaaaagaagagatgctcgaactattccataatgat
atgggtgaaaggaaacagagccatacctctaagagaagtaataatgcttctagtagaaga
aaatctaagagttctttcaagagtaaatcaaggtataaacggagaaagtag
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