Phoenix dactylifera (date palm): 103706508
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Entry
103706508 CDS
T03274
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103706508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103706508
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103706508
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
103706508
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
pAdhesive_17
Motif
Other DBs
NCBI-GeneID:
103706508
NCBI-ProteinID:
XP_038984119
UniProt:
A0A8B9ALE4
LinkDB
All DBs
Position
7:8208628..8219127
Genome browser
AA seq
1114 aa
AA seq
DB search
MEEISAEHHPVIPPPADGAGPSSLPQQASPSPSVSPAGSRYDDEEEDEGDVCRICRNPGD
AENPLRYPCACSGSIKYVHQDCLLQWLNHSNARQCEVCKHTFSFSPVYAENAPARLPFQE
FVVGMAMKACHVLQFFLRLAFVLSVWLLIIPFITFWIWRLTFVKSLGEAQRLFLSHISAP
LILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGHDAERDDEGHERHGARAVRRLP
GPANRIHAGDGNAEDAGGAQGIAGAGQIIRRNAENVAARLEMQAARLEAHVEQMFDGLDD
ADGAEDVPFDELVGMQGPVFHLVENAITVLASNAIFLGVVVFVPFSLGRIVLYYLSWFFS
SASSPMLAKVMPLTESALSLANTTFKNALTAVKNLSAESDNEGVLGHMVEAVAGSLKLNA
TVLDEVSNSLRTHVASDLFKGTFLGYSRLSDVTTLAVGYMFIFSMVFFYLGLLTLIRYTR
GERLIMGRFYGMATIAEAIPSLFRQFVGAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDV
CTLRMLGATISQRVKFFSMSPLSSCSMHWLVGIVYMLQISIFVSLLRGVLRNGVLYFLRD
PADPNYNPFRDLIDDPVHKHARRVLLSVAVYGSLIVMLVFLPVKLAMRLAPSMFPLDITV
FDPFTEIPADVLLFQICIPFAIEHFKPRATIKSLLRHWFMAVGWALGLTDFLLPRPVENS
GQEIGNAELARRDRMHDANQGGAGQPDLPLVPLIAVDDHNRRGHPIGNADVAEDSDVDDQ
ADSEYGFVLRIVLLLVLAWMTLLLFNSAMIVVPISLGRTLFNAIPRLPITHGIKCNDLFA
FSIGCYIIWAVVAGARYSIEYIKTRRAHVLVSQILKWCAIVLKSSALLSIWIFVIPVLIG
LLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLDHMAPLVDERWRRKFER
VRDDGFSRLRGLWVLREIVIPIVSKLLTALCVPYVFAKGIFPLFGYPLMVNSAVYRFAWL
GCLLVSVMCFCARRFHVWFTNLHNAIRDDRYLIGRRLHNFGEEKVENSESEIISPRNQDM
NPADAGVMQREQEADGLRQRHPNQHPNHQQRLAI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatctccgccgagcaccaccccgtcatccctccgcccgccgacggggcgggc
ccctcctcgttgccccagcaggcgtcgccgtcgccgtcggtgagccccgccggttcacgc
tacgacgacgaggaggaggacgagggcgacgtgtgccggatctgccgcaaccctggcgac
gccgagaaccctctccgctacccctgcgcctgcagcggcagcatcaaatacgtccaccag
gactgcctcctccagtggctcaaccacagcaacgctcgccagtgcgaggtgtgcaaacac
acattttctttctcccctgtttatgctgagaatgctcctgcaagacttcccttccaggag
tttgtggttgggatggcaatgaaagcatgtcatgtcctccaatttttcctccggcttgct
tttgttctttctgtttggctccttataataccttttattactttctggatatggcgcttg
acatttgtgaagagtcttggtgaagctcaaaggctgtttctgagtcacatatctgcacct
ttgattctaactgattgcttacatgggttcctactttctgctagcatcgtgtttatattt
cttggggcaacctcattaagggattattttagacacctacgtgaacttggaggacatgat
gctgagagggatgatgaaggtcatgaaaggcatggtgctcgtgctgtgagaagacttcct
ggccctgctaacaggatccatgctggtgatgggaatgctgaagatgcaggtggggcccaa
ggaatcgctggggcaggtcaaattataagaagaaatgcagaaaatgttgctgcacgtttg
gaaatgcaagctgctcgtcttgaagcacatgttgaacagatgtttgatggactggatgat
gcagatggtgcagaagatgtaccgtttgatgagcttgttggcatgcaagggcctgtattc
catttggttgaaaatgctataaccgtattggcaagcaatgcaatattcctgggtgttgta
gtttttgtacccttttcattaggaaggatagtactctactatctgtcatggttcttttca
tctgcatctagtccaatgttagcaaaagtcatgcctcttacagaatcagccctttcattg
gctaacactaccttcaagaatgcacttactgctgtaaagaacttgtcggctgaaagcgat
aatgagggtgttcttggtcacatggtggaggcagttgcaggatcattgaaattgaatgca
actgtattagatgaagtctctaatagtcttagaacacatgttgcatcagatctatttaaa
ggaacatttcttggctattcacgcctttcagatgtcactacacttgcagttgggtatatg
ttcatattttctatggtattcttctatcttggtctcctcactttgattcgatacactagg
ggcgagcgtttgattatggggaggttttatgggatggctacaatagcagaggcaatccca
tctcttttcagacagtttgtgggagcaatgaggcatctgatgactatggttaaggtcgct
tttcttctggtgattgaacttggagtctttccgttgatgtgtgggtggtggcttgatgta
tgtactttaaggatgctgggtgcaacaatttctcaaagggtcaagttcttttctatgtcc
ccattatcaagttgttcaatgcattggcttgttggaattgtttacatgctccaaataagc
atttttgtcagccttcttcgaggggtattgcgaaatggagttctatattttctacgggac
ccagcagatccaaattataatccatttcgtgatctaattgatgaccctgtgcataaacat
gcccgacgagttttgctgtctgttgctgtttatggaagcttgattgtgatgctagtcttt
ttacctgtcaaacttgctatgcgattagcaccttccatgtttccattggacatcactgtt
tttgacccttttacggagatacctgcggatgtgcttctgttccaaatctgcattccattt
gcgattgagcatttcaagccacgagcgacgattaaatcccttttgcgtcattggtttatg
gcagtcggctgggctcttggcttaactgatttcttactacccagacctgtggaaaattct
gggcaggaaattgggaatgcagaactagcaagacgagacaggatgcatgatgcaaatcaa
ggtggagctggccagcctgacctgcctttggtgccattaattgctgttgatgatcataac
aggagaggtcatcctattggaaatgctgatgttgctgaagattctgatgtagatgatcag
gcagattctgagtatggttttgtactccgtattgtgttattgctggtgttagcatggatg
actcttctgctctttaattcagcaatgattgttgtacctatttcacttgggcgcacactg
tttaatgccatccctcgcctcccaattactcatggtatcaagtgcaatgatttatttgca
ttcagtattgggtgttacatcatctgggctgtcgtagctggagccagatattcaattgaa
tacattaaaacccggagagcacacgttctggtatcacagattttgaagtggtgtgcaatt
gttctcaagagttctgcccttctgtctatatggatttttgttatccctgtgctgattggt
ctcctttttgagcttctggtgattgtgccgatgagggtgcctgtggatgaaagcccagtt
ttcctcctataccaggattgggctctggggctgatatttcttaagatatggactagactg
gttatgttggatcatatggcaccattggtggatgaaagatggcgcagaaagtttgagagg
gtgcgagacgatgggttctcccggctgagagggctttgggtcctgcgtgagattgtgatc
ccaattgtgtcaaagctgctgactgcactctgtgtgccttatgtgtttgcaaagggcatc
ttccctctctttggctacccattaatggttaactctgctgtgtaccggtttgcatggctg
ggctgcctccttgtcagtgtgatgtgcttctgcgccaggcggttccatgtttggttcact
aacctccacaatgccataagggatgaccgctatctgataggccgaaggttgcataacttt
ggggaggaaaaggtggagaacagcgagtcagagatcatcagtccgcgtaaccaagacatg
aacccagctgatgctggtgtgatgcagcgtgaacaagaagcagatgggcttaggcagaga
catcctaatcagcatcctaaccaccaacagaggctggccatatag
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