Phoenix dactylifera (date palm): 103706512
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Entry
103706512 CDS
T03274
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103706512
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103706512
03036 Chromosome and associated proteins [BR:
pda03036
]
103706512
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103706512
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103706512
PBAF complex
103706512
GBAF(ncBAF) complex
103706512
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
103706512
NCBI-ProteinID:
XP_008788860
UniProt:
A0A8B7C041
LinkDB
All DBs
Position
14:16285477..16287746
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AA seq
521 aa
AA seq
DB search
MASNSNNQSRAIGGPSPLGNPGMASPATNQPSHLRPPSLPQASGGSPFQGLFQTPPQSQV
HSPFQVQLGSQAQNAMLAAVGASSPSFSTPGMSATKRPPQKPPTRPPAPAPAVATPSFKS
AELTPAARRKKRKLPEKQLPDRVAALLPESALYTQLLEFEARVDAALSRKKIDIQEALKN
PPSMQRTLRVYVFNTFANQTRTIPEPKNAEPPSWSLKIIGRILEDGVDPDPVSGLPKPNP
MYPKFSSFFKRVTIALDPMLYPENPTIIWENSRSPAPHEGFEVKRKGDKEFTASIRLEMN
YNPEKYKLSPMLMEVLGIEVDTRARIIAGIWQYVKAKKLQNPSDPSYFTCDPPLKKVFGE
DKMKFAMVSQKISQHLSPPQPIHLEHKIRLSGNGAVGNACYDVLVDVPFPLQKEMSTFLA
NTEKHKEIEACDEVICASIKKIHEHRRRRAFFLGFSQSPVEFINTLIASQSRDLKLVAGE
AGRNAERERRSDFYNQPWVEDAVIRYLNRKPAGGNDAPGST
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaacagcaataaccaatcgagggcaatcgggggcccttcgcccctggggaat
cccggaatggcctcgccggcgaccaaccagccctcccatctccgccctccttcgctgcct
caggcgtcgggtggttcccctttccaaggccttttccagacaccgccccagtcccaggtc
cactcaccgttccaggtccagctcggctcccaggcccagaacgccatgctcgccgccgtc
ggagcctcttccccttccttctccacccccggcatgtcggccaccaaaaggcccccgcag
aaaccccccactcgccccccggcgcctgcccctgctgttgctactcctagcttcaagtct
gccgagctgaccccagctgcccggaggaagaagcggaagcttccggagaagcagctgccg
gaccgggttgctgccctcttgcctgaatccgccctctatacccagttgcttgaattcgaa
gcccgggttgatgcagccctttcaaggaagaagattgacatccaggaagccttaaaaaac
cctccttccatgcaaaggaccctcagggtttatgtcttcaatacctttgccaaccagacg
cgcacaattccggagccaaagaatgccgagcctccctcgtggtcactcaagatcattggt
aggatactagaggatggcgtggatccagaccctgtcagtggactgcctaagcccaatcct
atgtaccccaagttctcgtctttctttaagagggtcaccattgctctggacccgatgctg
tacccggaaaatccgacgatcatatgggagaactcacgctcaccagcaccacatgagggc
tttgaggtcaagcggaagggagataaggagttcactgccagtataaggcttgagatgaat
tataaccctgagaagtataaactgtcgcctatgttgatggaggttcttgggattgaggtt
gatacaagagccagaattatagctgggatatggcagtatgtcaaggcaaagaagttgcag
aaccccagtgatccgtcctatttcacttgtgacccacctttgaagaaggtgtttggagaa
gacaagatgaagtttgccatggtgtcacagaagatatcgcagcatttgtctcctccacaa
ccaatccatctggaacataagatcaggctttcagggaatggtgcagtgggcaatgcatgc
tatgatgtgctggtagacgttcctttccccctgcagaaagaaatgtcgaccttccttgcc
aacacagaaaaacacaaagaaattgaggcctgtgatgaagttatttgtgcttctattaag
aaaattcatgagcaccgtaggaggagggcattctttcttgggttcagtcagtctcctgtg
gagtttataaatactttgattgcttctcagagtagggacttgaagcttgttgctggggaa
gcaggtcgtaatgctgaaagggaacgtcgttctgatttctataaccaaccatgggttgaa
gatgctgtcatacgctatctgaatcgcaagccagcaggcggcaatgatgctcctggtagc
acatga
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