Entry |
|
Name |
(RefSeq) rRNA biogenesis protein RRP5
|
KO |
K14792 | rRNA biogenesis protein RRP5 |
|
Organism |
pda Phoenix dactylifera (date palm)
|
Brite |
KEGG Orthology (KO) [BR:pda00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:pda03009]
103706723
Ribosome biogenesis [BR:pda03009]
Eukaryotic type
90S particles
Other 90S particles
103706723
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
Unknown
|
AA seq |
1922 aa
MVALSEKKKPQMKRPIDGTKPHKSFKKPRKEKTRPPAPSELPSSLLVQDDDPDFPRGGAS
VLTREEIAEARAEAEEEFVRESKKSKGGKKKKGTKKSLAEAVDDFGSLFGNGVTGKLPRF
ANRISLKNISPRMKLLGVVVEVNPKDLVIGLPGGLRGYVRAEEVSDIIIDDGNKDSKSNL
LCSIFHVGQLVSCIVVRVDVDKKDGKGNRRIWLSLRLSLLHKGLTLDAVQDGMVLTAQIK
SIEDHGYILYFGVSSFTGFLPKSEQDGDLFISRQLLQCVVKSIDKARAVAIVTSDADLVS
KSAMKDLKGLSIDLLVPGMMVNARVHSTLENGIMLSFLTYFTGTVDIFHLQNSFSRATWK
DDYKQNKKVNARILFIDPSTRAVGLTLNPYIVQNKAPPAIVRTGEIYDNSLILRVDRGIG
FLLEVPSSPVPLPAYVSISDVSDEKVTKLEKKFKEGDYVRVRVLGMRHLDGLAMGTLKAS
AFEGSVFTHSDVKPGMLVKAKVTAVENFGAIIQFFGGVKALCPLQHMSELDILKPPKKFK
VGAELLFRVLGCKSKRITVTHKKTLVKSKLPVFASYADATEGLIVHGWIAKIAKHGCFVR
FYGGVQGFAQRSELGLEPGIEADAAYHVGQVVKCRVISSAPASRRINISFVISPKRISED
DIAKLGSIVSGVVERLTPAAVIIHVNGNAYLKGTLFDEHLADHQGQAVLLKSLLRPGYQF
DQLLVLDTEGQNLILSAKYSLINYAKEIPSDLSQIHPLSVVNGYVCNIIENGCFVRFLGR
LTGFSPKDKVTDQQIDNLSDAFYVGQSVRSHVLTVNGETGRIKLSLKQSLCSSSDVSFVR
GYFLLEEKIAALHISDANNPDSSWTRSFSIGSLVEGEIQEIKEFGVVVNFIDNGDVVGFV
PHHQLGGINVEVGSVIKALVLDIAKSDGLVDLSLKSELVTSACVDGAKKKRRRSTSTDLQ
LHQTVNAVVEIVKENYLVLSIPEYNYAIGYASMTDYNMQKLPHKHFLNGQSVLVTVGALP
SSCPSGRLLLLLKSTREVSETSRSKRAKKMSSYTVGSLVAAEIIDIKPLELILKFGTGFH
GRIHITEVFDNNHDMENPFSKFKIGQLLDARIVAKPEQSGKSGKGYRWELSVRPSLLTGE
STKIPTAEEFNFSVGSIVKGYVVKVDGEWVWLTVSRYVMAHIFFLDSSCEPGELQEFQQR
YSVGQAVKGKIVSANKEKKLLRLTSCLSSFVSESSVDHEIVKVDIQENRVSNVNCAEHIL
QGNIVGGKVKRILPGVSGLLVQIGPHLFGKAHYTELVDAWVAQPLSGYHEGQFVKCKILE
ITRSSEGTAHVDLSLRSSLQDIQSVNSTALDNNLNTHIKRFEKIEDLHPNMDVQGYVKSV
TSKGCFIMLSRMIDARILLSNLSDGYIENPEKEFPAGKLVHGRVLSVDPASKRVEVTLKT
DMKTEVAKSDPGVFCNLHVSDIISGQIRRTEPYGLFIAIDNTNVVGLCHKSELSDEPIDN
IETRYKAGDRVVATVLKVDEERHRISLGMKKSYFGNASDVHIISNHGTDDDSVDGTLLAL
QQNDDLPHIEKMFGCDSEDPAVLKQAETRASVLPLQVVLDDSDGSDLDNVTVSQEIVNVT
DMAAKKSARRMKKKAKEERELEISASEERNLQKDIPKTADEFEKLVRSSPNSSFVWIKYM
AFMLSLADVEKARSIAERALRTINIREEGEKLNIWVAYFNLENEYGSPPEEAVKKTFQRA
LQYCDPKKLHLALLGMYERTEQHKLADELLERMTKKFKNSCKVWLHCVQSFMKQRKDGIQ
PIVNRALLSLPHNKHIKFISQTAILEFKCGVPDRGRSMFEGILREYPKRTDLWSIYLDQE
IRLGDVEVIRALFERATSLSLPPKKMKFLFKKYLEYEKARGDDDRIEHVKNRALEYVESS
LA |
NT seq |
5769 nt +upstreamnt +downstreamnt
atggtggctctcagtgagaagaagaagccccagatgaagcggcccatcgacggaacgaag
ccccacaagtccttcaagaagccgaggaaggagaagacccgcccccccgctccatcggag
ctgccctcttccctcctcgtccaagacgacgatcctgatttccctagaggaggagcgagc
gttcttactcgggaggagatagcagaggctcgggcggaggccgaggaggagtttgtgagg
gagtccaagaagagcaagggcggaaagaagaagaaagggaccaagaagtcgttggctgaa
gccgtggatgattttggatcccttttcggtaatggcgtcaccgggaagctacctaggttt
gccaaccgcatctcgttgaagaatatttcaccaagaatgaagcttctgggagtcgttgtt
gaagtaaacccaaaagatcttgtaattggtcttccaggggggctgagaggatatgttcgt
gcagaagaagtatctgacattattatagatgatggaaacaaggattctaaaagtaatttg
ctttgtagcatattccatgtggggcagcttgtttcttgcatagtggtacgggtggatgtt
gataagaaagatggaaagggaaacagaagaatttggctgtcacttcgccttagtttgctg
cacaagggccttacgttggatgctgttcaagatgggatggttctgactgcacaaataaag
agtattgaagaccatggttacattctttacttcggagtgtcatcttttactggttttttg
ccaaagagtgaacaagatggtgatttatttattagcagacaacttttacaatgtgttgtc
aaaagtatagataaagctcgagctgttgctattgtgacttctgatgccgatttggtgtct
aaaagtgctatgaaagatctaaagggactctcaattgaccttttggttcctggcatgatg
gttaatgctcgtgtccactctacccttgagaacggaattatgctgtcattcctcacttat
tttactggaacggtagatattttccatctgcaaaactccttctcccgtgcaacttggaaa
gatgactacaagcagaataagaaggtgaatgctcggatattatttattgatccatcaact
agagctgtcggactgaccttgaatccttacattgttcaaaataaggctcctcctgctatt
gtcagaactggagaaatttatgataattcactaattttaagggttgatagagggattggt
tttcttcttgaagtaccgtcttctccggttcctttacctgcatatgtcagtatatctgat
gtttctgatgaaaaagttacaaaactagaaaaaaagttcaaggaaggagattatgttcgc
gttcgtgttcttggaatgaggcatttagatggactagcaatgggcaccttaaaggctagt
gcctttgaagggtctgttttcactcattcagatgtcaagcctggaatgttggtcaaagct
aaggtcactgctgtggaaaattttggtgcaattatacaattttttggtggtgtaaaagct
ctttgcccccttcaacacatgtcagagttggacattctaaagcctcctaagaagtttaag
gttggggctgagttgctgtttcgcgtgctaggttgcaaatccaagagaataactgtcaca
cacaagaaaactctagttaaatcaaagctgcctgtgtttgcttcatatgctgatgctact
gaaggattaattgtgcatggatggattgctaaaattgcaaagcatggttgctttgtgaga
ttttatggtggagttcagggttttgcacaaagatcagagcttggattggaaccaggaatt
gaggcagatgctgcatatcatgttggacaggtggtcaaatgtagggtaattagttcagct
ccagcttcgcgaagaatcaacattagttttgttatatctccgaaaaggatttctgaggat
gacattgcgaagttgggcagtattgtttctggtgttgttgagcgacttactcctgcagca
gttattatccatgtgaatggaaacgcttatttgaaagggacattatttgatgaacattta
gcagatcaccaggggcaagccgttctgttgaaatctttattgagacctggatatcagttt
gatcagcttttggtgctagatactgaaggccaaaacttaattctttcggcaaagtactct
cttattaattatgctaaagagataccttcagatctttcacaaattcatcctctgtctgtg
gtcaatggatatgtctgcaatataattgaaaatggctgctttgttcgttttcttggacgt
ttgactggattctctccaaaagataaagttactgatcaacaaatcgataatttatcggat
gcattctatgttggccaatcagttcgtagtcacgtcctaactgttaatggtgaaactggt
cggattaaactatccttgaagcagtctttatgttcctcatcggatgtttcatttgttcga
ggatattttcttctggaggagaagatagcagcattgcatatatcagatgccaataatcct
gattcaagttggacgagaagcttcagtattggcagtttggttgagggagagattcaggaa
ataaaagaatttggtgttgttgttaacttcatagataatggtgatgttgttggctttgtt
ccacatcatcaattgggtggaattaatgtggaagtgggatctgttattaaagctttagtt
ctggatatagctaaatcagatggccttgttgatctatcccttaaatcggagctggtgaca
agtgcttgtgtagatggagctaagaagaagcgtcgtcgaagtacatctacggacttgcag
ctgcaccaaacagtaaatgctgtggtggagattgtgaaagaaaattatttggttctttcg
attccggagtataattacgctataggatatgcgtcaatgactgactataacatgcaaaag
cttcctcacaagcacttcttgaatggacaaagtgtccttgtgactgttggggcacttcca
agctcctgtccttctggaagactattgctgctgcttaagtctacgcgtgaggtttctgag
acttctaggtctaaaagggctaaaaaaatgtctagctacacagtgggctcacttgttgca
gccgagattattgacataaaacctcttgaacttattttgaaatttgggaccgggtttcat
gggagaattcatataaccgaggtattcgacaataatcatgatatggagaatcctttcagt
aaatttaaaattggacaattgcttgatgcacggattgttgcgaagcctgagcagtcagga
aagagtggaaaaggatatcgatgggaactgtcggttagaccctcactgcttacaggagaa
tcgacgaagattcccactgccgaggagttcaatttttcagtgggaagcattgtcaaggga
tatgttgtcaaggtggatggtgagtgggtctggttaactgtgtctcgatacgtcatggct
catatttttttccttgatagttcttgtgaacctggtgagcttcaagaatttcagcaacgt
tacagtgtgggacaagctgtcaaaggcaaaatcgtaagcgctaataaagagaaaaagctg
ttgagattgacatcatgcctatcttctttcgtttctgagtcatcggttgatcatgaaatt
gtaaaggtagacattcaagaaaatagagtttctaatgtgaattgtgctgagcacatttta
caaggtaatattgttggtggtaaagtcaagagaatccttcctggtgttagcgggctgctt
gtgcagattgggcctcatctttttggaaaggctcattatactgaacttgtagatgcatgg
gttgctcaacccctatcaggatatcatgaaggccaatttgtcaaatgtaagatcctggaa
ataactcgttcatcggagggaactgcacatgttgatctgtctctacgttcttcattacaa
gacatccaatcagttaattctacagcgcttgacaacaatttgaatactcacatcaagcgg
tttgaaaagattgaagatcttcatcctaacatggatgtgcagggatatgtcaagagtgta
acttcgaaaggatgtttcattatgctgtctagaatgattgatgctagaatcctcctatca
aatttgtctgatggatacattgaaaatcctgaaaaagagtttccagccggaaaacttgta
catggcagggttttatccgtggatcctgcatccaaaagagttgaggtgacattgaagacg
gatatgaagaccgaggtagcaaaatctgatccaggtgttttctgtaatctacatgtcagt
gatattatttctgggcagattagacggactgagccatatggcttgtttatagcaattgat
aacaccaacgtggttggtttatgtcataaatcagaactttcagatgagcccattgataac
attgaaactagatataaagcaggtgatagagttgtagcaacagttttgaaggttgatgag
gaaagacatcgaatatcccttggaatgaagaaatcttactttggaaatgccagcgatgtt
catatcatctcaaatcatggtacagatgatgacagtgttgatggtacattgcttgctttg
cagcagaatgacgacctaccccatattgaaaagatgtttgggtgtgatagtgaggatcct
gcagttctcaaacaagcggaaacaagggcttctgttcttcctctgcaggttgttcttgat
gactcggatggttctgatttggataatgtgactgtaagccaggaaattgtcaatgtgact
gatatggctgcaaaaaagagtgctcgacgcatgaagaaaaaagccaaggaggaaagggag
ctagaaatcagtgcttctgaggagaggaatctacagaaggatataccaaagacagcagat
gaatttgagaaattggtcagaagttctcctaacagtagttttgtctggataaagtacatg
gctttcatgttatctctcgcagacgttgaaaaagcacgctccattgcagaacgggctctg
agaacaataaacatcagagaagagggggaaaagcttaatatttgggtagcatattttaat
ctagaaaatgaatatggaagtccacctgaggaggctgttaagaaaaccttccagagagca
ttgcagtactgtgatcccaaaaaattgcatctagctcttctgggaatgtatgaaaggact
gaacaacacaagctggcagatgagcttctggagagaatgaccaaaaagttcaaaaactca
tgcaaggtctggctacactgtgttcaaagcttcatgaagcaacgcaaagatggaattcag
cctattgtaaaccgtgctcttctgagtctgccacacaacaagcatattaaattcatctcc
cagactgctatcctagaattcaagtgtggtgtgcctgatagaggacggtctatgtttgaa
ggtatattgcgggagtatcccaagagaacagacctttggagcatatacctcgatcaagaa
attcgcctgggtgatgtggaagtgatacgtgcattatttgaacgggcaacatctctgagt
cttccaccaaaaaaaatgaagttcttgtttaagaagtatctagagtacgagaaggctcgt
ggtgatgacgacaggatagagcacgtcaaaaatagagctttggagtatgtggagagctcg
ctcgcttga |