Phoenix dactylifera (date palm): 103706949
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Entry
103706949 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 38
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103706949
03015 mRNA surveillance pathway
103706949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103706949
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103706949
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103706949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Cupin_NOL9
Motif
Other DBs
NCBI-GeneID:
103706949
NCBI-ProteinID:
XP_038985582
UniProt:
A0A8B9AIH3
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All DBs
Position
8:31453841..31460878
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AA seq
476 aa
AA seq
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MGMALVISNDGLRRLASRLRTEFAIYYIIIQSGRRSVQGSKPDRNSSLIICISLFSATYH
HSVLLSHGGERHALPGRGGGGAGAGGGAGAGGGGGEKGRGEEILGDEEPEEEATAPPPPP
TTSSSGAEAETAELKKIEELSISEGLEDPDELDIKTVTSGETVYESAVKFEDLPLSQELL
KGLKLEMKFSRPSKIQAVTLPMILTPPFKDLVAQAHNGXGKTTCFVLGMLSRVDPSKKIP
QAICICPTRELAIQNQNVLLKMGKYTGITSMCAIPSDSANYIPISRRPPVTDQVVIGTPG
TIKKWTSARKLATRDVMILVFDEADHMLAEDGFKDDSERIMKEIRRSSGSCQVLLFSATF
NETVKSFVSGXLGLHQIFVKKKSSHWKKXAYKVHVQMIANWKXLRDKIFEFDKGGRLLYL
SGQGTVHMLHTSLLKDGYDAHQFRCTQAEDRDKLYRXFKVGLTRVLITTLIFLLEF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgggtatggcattggttatcagcaatgacggcttgaggcggctcgcgtcaagactacgc
accgagtttgctatatattatataataatacaaagcggtcgacgctcggtccaaggctcg
aagcccgaccgaaactcttcgcttatcatctgcatctctctcttctcggcgacctaccat
cactctgtccttctctctcatggcggagaacggcacgccctccccggccgcggaggcggc
ggagcgggcgccggcggcggagcgggcgccggcggcggcggtggagaaaaaggtcgagga
gaagagatcctgggcgatgaagagcccgaggaggaggcgaccgccccccctccgccgccc
accaccagtagcagcggagcggaggctgagaccgctgagctcaagaagatcgaggagctc
agcatttcagagggcctcgaggatccggatgaattagatataaagaccgtgacgtcgggg
gagacagtttatgaatcggctgttaaatttgaggacctacccctgtcacaggagcttctt
aagggtttgaaactcgagatgaagtttagcaggcctagcaagattcaggcagtaacccta
ccgatgattcttactccccccttcaaagatctggtggctcaagcccacaatggtnccgga
aaaactacgtgtttcgtgcttggcatgctcagccgagtcgatccgagtaaaaagatacca
caagcaatctgcatatgccctaccagagagctggcgatccagaatcagaatgtgcttttg
aagatgggaaagtatactggcataacttcaatgtgtgctataccatcagattcggcaaat
tatatcccgatctcaagacgtccgccagtaaccgatcaagtagtgatcggcactcctggt
acaattaaaaagtggacctcagcaaggaagttggccacgcgggatgtgatgatccttgtc
tttgatgaggctgaccacatgctagctgaggatggctttaaagatgattctgagagaatc
atgaaggagattcgaaggagcagtggcagctgccaggtgctactcttctctgctaccttt
aatgaaactgtcaagtcatttgtatcaggtnggttaggattgcatcagatcttcgtgaag
aagaagagctcacattggaaaaagtaagcatacaaggttcatgtccagatgattgcaaat
tggaagtgattaagggataaaatttttgaatttgacaagggtggcagactattatatttg
tccggacaaggaacagtgcacatgttacatacgtcattacttaaggatggttatgatgca
catcaattcaggtgcactcaagcagaagatagggacaaattatacaggnnatttaaagtt
ggactaacccgtgtccttataactactctgatcttcttgctcgagttttga
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