Phoenix dactylifera (date palm): 103706955
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Entry
103706955 CDS
T03274
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103706955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103706955
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
103706955
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
103706955
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
103706955
NCBI-ProteinID:
XP_008789464
UniProt:
A0A8B7C190
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Position
18:complement(1001558..1008750)
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AA seq
193 aa
AA seq
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MGGEGVVTPGEVVGESNQLIAGRGVYLAPNGRTLRASLTGLRKILPPPPDSSDQRSTVEV
VGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVESKAVREKFTGIIRQQDVRATEIDK
VDMYLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGATMVPISWTEMQCPL
TGQVERRKVAKAD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgggaggagaaggtgtggtcacccccggcgaggtggtgggcgagtccaaccagctgatc
gccgggaggggagtgtacctggcacccaacgggcgcaccctgcgcgcttccctcaccggc
ctccgcaagatcctccctcctcccccggactcctccgaccagagatccaccgtggaagtc
gtagggcacaaggcccatggagctgtcccgcaaccggggtctgtggtcatcgctcgagtg
acaaaagtgatggccaggatggcttcagctgatataatgtgtgtcgagtccaaagctgtg
agggaaaagtttacgggcataattaggcaacaagatgttcgtgcaactgaaattgataaa
gtggatatgtatttgtcatttcgtcctggtgacattgtcagagccttagttctctctctt
ggagatgcaagggcatattacctttccactgcaaagaatgaattgggagtggtatcagct
caaagtatagcaggtgctactatggttccaatcagttggacagagatgcaatgcccactg
actggccaggttgaacggagaaaagttgcgaaggcagactag
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