KEGG   Phoenix dactylifera (date palm): 103706955
Entry
103706955         CDS       T03274                                 
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103706955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pda03019]
    103706955
Messenger RNA biogenesis [BR:pda03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103706955
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     103706955
SSDB
Motif
Pfam: EXOSC1 ECR1_N RRP4_S1
Other DBs
NCBI-GeneID: 103706955
NCBI-ProteinID: XP_008789464
UniProt: A0A8B7C190
LinkDB
Position
18:complement(1001558..1008750)
AA seq 193 aa
MGGEGVVTPGEVVGESNQLIAGRGVYLAPNGRTLRASLTGLRKILPPPPDSSDQRSTVEV
VGHKAHGAVPQPGSVVIARVTKVMARMASADIMCVESKAVREKFTGIIRQQDVRATEIDK
VDMYLSFRPGDIVRALVLSLGDARAYYLSTAKNELGVVSAQSIAGATMVPISWTEMQCPL
TGQVERRKVAKAD
NT seq 582 nt   +upstreamnt  +downstreamnt
atgggaggagaaggtgtggtcacccccggcgaggtggtgggcgagtccaaccagctgatc
gccgggaggggagtgtacctggcacccaacgggcgcaccctgcgcgcttccctcaccggc
ctccgcaagatcctccctcctcccccggactcctccgaccagagatccaccgtggaagtc
gtagggcacaaggcccatggagctgtcccgcaaccggggtctgtggtcatcgctcgagtg
acaaaagtgatggccaggatggcttcagctgatataatgtgtgtcgagtccaaagctgtg
agggaaaagtttacgggcataattaggcaacaagatgttcgtgcaactgaaattgataaa
gtggatatgtatttgtcatttcgtcctggtgacattgtcagagccttagttctctctctt
ggagatgcaagggcatattacctttccactgcaaagaatgaattgggagtggtatcagct
caaagtatagcaggtgctactatggttccaatcagttggacagagatgcaatgcccactg
actggccaggttgaacggagaaaagttgcgaaggcagactag

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