Phoenix dactylifera (date palm): 103707006
Help
Entry
103707006 CDS
T03274
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103707006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103707006
03009 Ribosome biogenesis [BR:
pda03009
]
103707006
04131 Membrane trafficking [BR:
pda04131
]
103707006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103707006
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
103707006
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
103707006
Membrane trafficking [BR:
pda04131
]
SNARE
SNARE associated proteins
Others
103707006
Autophagy
Aggrephagy
Other aggrephagy associated proteins
103707006
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103707006
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
CDC48_2
AAA_16
AAA_2
AAA_5
AAA_22
AAA_33
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
AAA_28
Mg_chelatase
ATPase_2
AAA_18
Parvo_NS1
nSTAND_NTPase5
Viral_helicase1
ABC_tran
NB-ARC
AAA_7
NACHT
Vps4_C
TsaE
IstB_IS21
DUF815
Zeta_toxin
AAA_24
AAA_lid_PRS2_C
Zot
Motif
Other DBs
NCBI-GeneID:
103707006
NCBI-ProteinID:
XP_008789550
UniProt:
A0A8B7C198
LinkDB
All DBs
Position
18:1631936..1638876
Genome browser
AA seq
810 aa
AA seq
DB search
MANQGEAASSDSKGTKRDFSTAILERKKAANRLIVDEAVNDDNSVVSLHPETMEKLQLFR
GDTILLKGKKRKDTICIALADDACEEPKIRMNKVVRSNLRVRLGDVVSVHQCQDVKYGKR
VHILPIDDTIEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPPEY
CVVAPDTEIFCEGEPVKREDEERLNEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIG
VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAE
KNAPSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSID
PALRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLLEDVDLERIAKDTHGYVGADLAAL
CTEAALQCIREKMDIIDLEDESIDAEILNSMAVTNEHFKTALGTSNPSALRETVVEVPNV
SWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANE
CQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAG
GAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEASRY
QIFKACLRKSPVAKEVDLGALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERKRS
ENPEAMEEDDADEVAEIKAVHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF
STESDTGAGTIGSDPFATSGAGADEDDLYN
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatcagggcgaggccgcctcttccgattccaagggcacgaagagggatttcagt
actgcgattcttgagaggaagaaggccgcgaatcgattgatcgtggacgaggctgtcaat
gacgacaattcggtggtctctttgcacccagagacgatggaaaagctgcagcttttccgt
ggcgatacgatcctgctgaagggcaagaaaaggaaagatactatttgcatcgcacttgct
gatgatgcgtgtgaagagcctaagataaggatgaacaaagttgttagatcaaatctcagg
gttaggcttggtgatgttgtttctgtccatcagtgccaggatgtgaagtacgggaagcgt
gtccatattcttcccatagatgataccattgaaggtgttacagggaacttgtttgatgca
tatttgaagccatattttctggaggcatatcgccctgtaaggaaaggggatctttttctt
gttagaggtggaatgcgaagtgtagaatttaaggttatagaaaccgacccacccgagtat
tgtgttgttgctccagacacagagatcttctgtgagggggaacctgtgaaaagagaggat
gaggaaagacttaatgaggtaggatacgatgatgtgggtggtgtccgaaagcagatggct
cagattcgagaattagttgagcttccactaaggcaccctcaacttttcaagtctattggt
gtaaaaccaccaaaaggaatcttgctgtatgggcctcctggttctgggaagacactcata
gcccgagctgttgcaaatgagactggagcatttttcttctgtatcaatggccctgaaatt
atgtcaaaactagctggagaaagtgaaagcaatcttaggaaggcttttgaagaagctgaa
aaaaatgcaccatcaattatttttattgatgagattgactccattgctcctaagagggag
aaaacccatggagaagttgagaggcgtattgtttctcagctcttgactttgatggatggt
ttgaaatctcgtgcgcatgtaattgtcatcggtgctaccaatcggcccaacagtatcgac
ccagctctcagaaggtttgggaggtttgatagggaaattgacattggtgtgccagatgaa
gttggacgtctggaagttcttcgcatccatacaaagaacatgaagcttcttgaagatgtt
gatttggaaagaattgccaaggacacgcatgggtatgtcggggctgatctggctgctttg
tgcacagaagctgctcttcagtgcatacgggagaaaatggacatcattgacttagaagat
gaaagcatagatgctgagatactgaactctatggctgtcaccaatgaacatttcaagact
gctcttggaaccagtaatccgtctgcactccgagaaacagttgttgaagtgcccaatgtc
agctgggatgatattggtggtctcgagaatgtcaagagggaactgcaggagactgttcaa
tatccagttgaacatcctgagaagttcgaaaaatttggcatgtcaccttcgaagggagtc
ctgttctatggacctcctggttgtgggaaaaccttgttagccaaggcaattgctaatgaa
tgccaagcaaactttatcagtgtcaagggtcctgaacttttgactatgtggtttggtgag
agtgaagcgaatgttcgagaaatctttgacaaggctcgccagtctgcaccatgcgtcctc
ttttttgatgagcttgattccattgctactcagagagggagcagtgttggagatgcagga
ggcgctgctgatagggttctcaatcagctgttgacagagatggacggcatgtctgccaag
aaaactgtttttatcatcggggcaaccaacaggcctgacatcatagatccagcattgctc
aggccaggccgtcttgaccagttaatttatatccccctcccagacgaagcctctcgttac
cagatatttaaagcttgcctaaggaagtcccctgttgcaaaagaggtggacctgggggct
cttgccaagtacactcaaggctttagtggggcagatattactgagatttgccaacgggct
tgcaaatatgctattagagaaaacattgagaaggatattgaaagggagaggaagaggagc
gaaaatccagaggctatggaggaagatgatgctgatgaagttgcagagatcaaagctgtt
cacttcgaagagtcaatgaagtttgcccgaaggagtgtcagtgatgctgacatacggaaa
taccaggcttttgcgcaaactttgcagcaatcgaggggctttggaagcgaattccgcttc
tcaactgagtcggacacaggtgctgggactattggatctgatccatttgctacgtcaggt
gctggcgctgatgaggatgatctatacaattaa
DBGET
integrated database retrieval system
