Phoenix dactylifera (date palm): 103707011
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Entry
103707011 CDS
T03274
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103707011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103707011
03110 Chaperones and folding catalysts [BR:
pda03110
]
103707011
03029 Mitochondrial biogenesis [BR:
pda03029
]
103707011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pda04147
]
103707011
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103707011
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103707011
Chaperones and folding catalysts [BR:
pda03110
]
Heat shock proteins
HSP60 / Chaperonin
103707011
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103707011
Exosome [BR:
pda04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103707011
Exosomal proteins of other body fluids (saliva and urine)
103707011
Exosomal proteins of breast cancer cells
103707011
Exosomal proteins of colorectal cancer cells
103707011
Exosomal proteins of bladder cancer cells
103707011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103707011
NCBI-ProteinID:
XP_008789558
UniProt:
A0A8B8J4L0
LinkDB
All DBs
Position
18:complement(1717951..1727107)
Genome browser
AA seq
579 aa
AA seq
DB search
MATANAIFSASILRSPLQREGLRRRASQGQRPRQLVVRAKAKEIAFDQASRSSLQCGVEK
LANAVGVTLGPRGRNVVLDEFGNPKVVNDGVTIARAIELADPMENAGAALIREVASKTND
TAGDGTTTASVLAREIIFLGLLSVTSGANPVNIKKGIDKTVQGLVEELEKKARPVKGRSD
IKAIASISSSNDEFVGNMIADAIDKVGPDGVLSIESSSSFETSVEVQEGMEIDRGYVSPQ
FVTNLEKLIVEFENAKVLVTDQKISTIKQIIPLLEKTTQLRAPLLIIAEDVTGEALATLV
VNKLRGVLNVAAIKAPGFGERRKAMLQDIAILTGAEFQAQDLGLLIENASVEQLGTARKV
TISQNSTTIIADAATKDEIQARIAQLKKELAQTDSVYDSEKLAERIAKLSGGVAVIKVGA
ATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAFVHLSASVPAIKNKLEDPDERLGAD
IVQKALLAPAALIAHNAGVEGEVVVEKIKDSKWEVGYNAMTDEYENLVEAGVIDPAKVAR
CALQNAASVAGMVLTTQAIVVEKPKPKARPAAQPQGLTI
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcgaatgcgatcttctcagcctccatccttcgctcccctctccagcgggag
ggcttgagaaggagggcgagccaggggcagaggccgaggcagctggtggtgcgcgccaag
gccaaggagatcgctttcgaccaggcctcgaggtcttccctccagtgcggcgtcgagaaa
cttgccaatgccgtcggagtcactcttggccctagagggaggaatgttgtgttggatgaa
tttggaaatcccaaggtggttaatgatggcgttacaattgctcgcgctattgagcttgct
gatcccatggagaatgcaggtgcagccttgatacgggaggttgcaagcaagacaaatgac
acagccggtgatggcaccacgactgcatcagttctggctcgtgaaatcatattcttgggt
ttattaagtgttacttctggggcaaatcctgttaatatcaagaagggaattgacaagact
gtgcaggggctagttgaggagcttgaaaagaaagctcggcctgttaagggacgttctgat
attaaagctattgcctctatctcatctagcaatgatgagtttgtgggcaacatgattgct
gatgctattgataaagttggtcctgatggtgttttgtctattgagtcttcgtcatcattt
gagacaagtgttgaggttcaggaaggaatggagattgacagaggttatgtttccccacaa
tttgtcacgaaccttgagaagttgatcgtggaatttgaaaatgccaaagttctggtgact
gatcaaaagatttcaacaataaagcaaattattcctttgttggagaagacaacacaattg
agagctccgctgctcataattgctgaggatgtaacaggggaagctttggcaacccttgtt
gtgaataagcttcggggtgttctcaatgttgctgcaatcaaggcacctggttttggtgag
agaaggaaggcaatgcttcaagatattgcaattttgacgggtgctgagttccaggcccaa
gatcttggcttgttgatagagaatgcatctgtggagcagcttggcactgcaagaaaggtc
actatctctcagaactctacaaccatcattgcagatgcagcaaccaaagatgagatccag
gccagaattgcccagttaaagaaagagcttgctcagacagactctgtttatgattctgag
aagctggctgaaagaatcgcaaaactatctggtggtgtggctgttataaaagttggtgct
gcaacggagacggagcttgaggaccgcaagctcaggattgaagatgccaagaacgctact
tttgcagctatagaggaagggattgttcctggtggtggtgctgcctttgttcacctgtcc
gctagtgttcctgccatcaagaacaagttggaagacccagatgagcgcctgggtgctgac
attgtgcagaaagcactgttagcacctgcagctttgatagctcataatgcaggagtggag
ggggaagtggtggtggagaagatcaaggacagcaagtgggaggttggttacaatgcaatg
actgacgagtatgagaatctcgtagaagctggagtcattgaccctgcaaaggtggccaga
tgtgcgctacagaatgctgcctccgtggctggaatggtgctaacaacacaggccattgtg
gtggagaagcccaagccaaaggctcgccccgctgcacaaccccagggccttaccatatga
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