Phoenix dactylifera (date palm): 103707242
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Entry
103707242 CDS
T03274
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103707242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103707242
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
SR proteins
103707242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_YTH1
RRM_7
RRM_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
103707242
NCBI-ProteinID:
XP_038988688
UniProt:
A0A8B9AXX5
LinkDB
All DBs
Position
13:1596716..1609992
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AA seq
299 aa
AA seq
DB search
MSRRSSRTLYVGNLPGDIREREVEDLFYKYGPIVDVDLKIPPRPPGYAFVEFEDPRDAED
AIRGRDGYNFDGHRLRVELAHGGRGQSSSFDRHSSHSSGGRRGGVSRRSEYRVLVTGLPS
SASWQDLKDHMRRAGDVCFSEVFRDGGGTTGIVDYTNYEDMKYAIKKLDDSEFRNAFSRA
YVRVKEYDSRRSLSRSRSRSHSYSRSRSPSRSRSYSRSQSKSPKAKSSHHSLSRSRSVSS
RSRSGSRGRSLSRSQSRSRSPLASPLPSKPASRSPRKKSPSRSRSRVSSRSPSPAAKSD
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgttcgagccgaaccctttatgtcggcaatctccccggagacatccgcgag
agggaggtcgaagatttattttacaagtatgggcccattgttgatgttgatctgaagatt
cctccaaggcctccaggttatgcttttgtcgagtttgaagatccccgtgatgctgaagat
gcaattcgtggtcgtgatggatataattttgacggtcacagattaagagtggaacttgca
catggtggacgaggtcagtcttcatcgtttgaccgccatagcagtcatagcagtggtgga
cgccgtggtggtgtctccaggcgttcagagtatcgtgttcttgtcaccggtttaccttca
tctgcatcttggcaagatctaaaggaccacatgcgccgagctggtgatgtttgtttctct
gaagtgttccgtgatggtggaggtactacaggaattgtggattatacaaactatgaagat
atgaaatatgcgatcaagaagcttgatgattctgagtttcggaatgcattttctcgggca
tatgtaagggtaaaggagtatgactctaggagaagcttatctaggagccgaagccgtagc
cattcctactcaagaagccggagtcccagtcgcagtagaagttacagccggagccagagc
aagtctccaaaggcaaaatcatcacaccattcattgtcaagatcaagatcagtatcttct
cgttcacgctcaggatcaaggggacgctctttgtcaagatcacaatcaagatccagatca
cccttggcttctccactgcctagtaaacctgcaagcagaagtcctaggaagaagagtcct
agcaggagcaggagcagggtttcatcgagatctccatcccctgctgccaaatctgattaa
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