Phoenix dactylifera (date palm): 103707294
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Entry
103707294 CDS
T03274
Name
(RefSeq) nuclear cap-binding protein subunit 1-like isoform X1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103707294
09122 Translation
03013 Nucleocytoplasmic transport
103707294
03015 mRNA surveillance pathway
103707294
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103707294
03041 Spliceosome [BR:
pda03041
]
103707294
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103707294
Spliceosome [BR:
pda03041
]
Common components
Common spliceosomal components
Cap binding complex
103707294
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
CCDC39
CC_Bre1
Motif
Other DBs
NCBI-GeneID:
103707294
NCBI-ProteinID:
XP_008789951
UniProt:
A0A8B9AT24
LinkDB
All DBs
Position
13:2013536..2051610
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AA seq
886 aa
AA seq
DB search
MSSWRTLLLRIGEKCPEYGGATDLKEHIETCYGVIWREFEHSKDDIFELLLQCAEQLPHK
IPLYGVLVGLINLENEDFAKRVVDTTHSILQDAIYLGNCNRIRLLLRLLTGLMCSKVILP
SSIVEVFETLLSSAAIIVDEEAGNPSWQSRADFYITCILSCLPWGGAELIEQVPDEFERV
MVGVQSYLSIRRHSQDIGFTVFDSDEDKFLEEKDFVEDLWDRIQVLSNNGWKTDSVSRPH
LSFEAQLVTGKSHSLSPISCPELPEPSTLLTAFSRGREKHQVQLKYPQRLRRLNIFSSEK
AENMQPIDRFIVEEYLLDVLHFFNGCRKECASYMVGLPVPFRYEYLMAETIFSQILLLPQ
PPFKPIYYTLVIIDLCKALPGAFPAVVAGAVRALFDRIADLDMECRTRLILWFSHHLSNF
QCIWPWEEWAYVKDLPKWAPQRVFVQEVLEREVRLSYWDKIKQSIENAPALEQLLPPRGG
PNFKYIIEDSQEGMEGHTLSKELNSMIRARKTAREITLWVEENIIPLHGFNVALEVVVQT
FLDIGSKSFTHLITVLERYGQVIAKLCTDQDKQILLLEEVSSYWKNNTQMTAIAIDRMMG
YRLISNLSIVRWVLSPSNINQFHTSDRPWEILRNSLNKTYNRVTDLRKEIQSLKKSVLLA
EEATVKAMKEYEAAESKLDVVDDQPVQSEKPGRLKRLKGYVEKAKDDETSIQESLEAKEA
LLARALEENKALFFSLYKSFKDVLMERLPPVSADGKLPKLRTANVDSVTIDSEPSTMDVD
HDDGKTDNSQSNGERVFHSYTTGEQEQWCLCTLGYVKAFSRQYASEIWPHIDTLDSEVFA
GDVHPLFRNAAYAVSHFVLSKKKEKNIKSVSGEIRVYVLMQVVIPV
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtagctggcggacgcttctgctaaggatcggcgaaaagtgcccggagtatggcggc
gccaccgacctcaaagaacacattgaaacatgctatggtgtaatatggcgagaatttgag
cattctaaagatgacatctttgagctccttctgcagtgtgctgaacaactaccacacaaa
attcctttgtatggcgtactggttggtttgataaatttagaaaatgaggactttgctaag
agagtggtagataccacacattctatcttacaggatgcaatatatttgggaaattgtaac
aggattcgtttattgttgcggttgctcacagggctgatgtgcagcaaagttatcttgcct
agttcaattgttgaggtctttgagacactgttgtcatctgctgcaatcatagtagatgag
gaggctggaaatccttcctggcaatcgcgtgctgacttttacatcacttgtattttgtct
tgtcttccatggggaggtgctgaactgattgagcaagttcctgacgagtttgagagagtt
atggttggtgtacaatcttatttaagtatcagaaggcactctcaagacattggtttcaca
gtgtttgattcagatgaggacaaatttctcgaggaaaaggatttcgtagaagatttatgg
gatcgtatacaagttctttcgaacaatggatggaaaaccgatagtgtttcaagacctcac
ttgtctttcgaagcacaattggtgactggaaaatctcacagtctttcgcctatcagttgc
cctgagctacctgaaccatcaactttacttactgcattctctagagggagagaaaaacat
caagtccagttgaagtatcctcagaggcttcgcaggcttaacatattttcttcagaaaaa
gctgagaacatgcaaccaattgatcgttttattgttgaagaatatttgctggatgtgctt
catttctttaatggatgccgaaaggaatgtgcttcctatatggtcggtctgcccgtaccc
ttccgctatgaatatctgatggcagagacgatattttctcagatactattgttaccacag
ccaccatttaagccaatatactacacgctggttatcatcgacctttgcaaggcactccca
ggggcattccctgctgttgtagcgggagctgtccgtgctctctttgacagaattgctgat
ttggacatggagtgccgcactaggctcattttatggttttctcatcacttatcaaacttt
cagtgtatttggccatgggaagaatgggcttatgttaaagatcttccaaagtgggccccg
caaagggtttttgttcaagaagtattagaaagggaagttcgtttgtcatactgggacaaa
atcaagcagagtattgaaaatgcacctgctttagagcaattgcttcccccaaggggtggg
cctaatttcaagtacattattgaagatagtcaagaaggcatggaaggtcacacactttct
aaggagttaaacagcatgattagggcaaggaagactgctcgtgagattactttatgggta
gaggaaaatataattccattacatggctttaatgttgcacttgaagttgttgtccagact
tttcttgacattggttcaaaaagtttcactcatttaatcacagttttggagagatatggt
caggtcatagctaagttatgtactgatcaggataagcaaattttgctactagaggaagtc
agttcatactggaagaacaatacccagatgactgctatagccatcgatagaatgatgggc
taccgactcatatccaatttgtcaattgttagatgggttttgtctccttctaatattaac
caattccatacttccgatcgtccatgggagattcttaggaattctctcaacaagacctac
aatcgtgttaccgatcttaggaaggaaatccaatcgctcaagaagagtgttctattagct
gaggaagccacagtcaaggctatgaaggagtatgaggctgctgaatcaaagctagacgtg
gtggatgatcagcctgttcagtctgaaaaaccaggaaggttaaaacggcttaaggggtat
gtggagaaagcaaaagatgatgagacttctatacaagaatctttagaagctaaggaagct
ctccttgctcgagcacttgaagaaaataaggcactatttttttcattatataagagcttc
aaagatgtgcttatggaacgcctgcctcctgtgtctgctgatggaaagttgcccaaacta
aggactgctaatgtagattccgtgactatcgactctgagccatcaactatggatgtggac
catgatgatggaaaaaccgataatagtcaatcaaatggtgagagagtattccacagctac
accactggggagcaggagcagtggtgcctttgcacattgggctatgtcaaggcattttcg
aggcaatatgcaagtgagatctggcctcatattgatacactggactctgaagtcttcgcc
ggagacgtccatccgcttttccgcaatgctgcttatgcagtgtcccattttgttttatca
aaaaaaaaagagaagaatataaagtcggtgtcgggtgaaatacgcgtctatgtgcttatg
caggttgtcattcctgtgtga
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