Phoenix dactylifera (date palm): 103707452
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Entry
103707452 CDS
T03274
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03030
DNA replication
pda03410
Base excision repair
pda03420
Nucleotide excision repair
pda03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103707452
03410 Base excision repair
103707452
03420 Nucleotide excision repair
103707452
03430 Mismatch repair
103707452
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pda03032
]
103707452
03400 DNA repair and recombination proteins [BR:
pda03400
]
103707452
DNA replication proteins [BR:
pda03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103707452
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103707452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
RCF1-5-like_lid
PTCB-BRCT
AAA_22
AAA_30
Gp44_lid
Rad17
BRCT_2
RsgA_GTPase
AAA_19
AAA_assoc_2
AAA_5
nSTAND3
Zeta_toxin
AAA_18
Sigma54_activ_2
RuvB_N
AAA_16
DNAX_ATPase_lid
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
103707452
NCBI-ProteinID:
XP_008790175
UniProt:
A0A8B7C2A6
LinkDB
All DBs
Position
8:complement(30741997..30763876)
Genome browser
AA seq
986 aa
AA seq
DB search
MSSDIRKWFMKQHDKGNGTASKPAAKPAMAASEKPPAPVLDKSVQGAQENSGRRKTSKYF
ATTTATESSSKKTTKDEKVTEKSPAKRKAQKITEDFQDDVKPVPAKKFHKDEDDDFVPSN
DRKKAAEVKPSKKLNSRSSGGISKNSVDKNDVDYDEDELDDKYVETPVKAGGRGRGGRGA
GAAAGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGAPECLAGLTFVISGTLDSLEREEA
EDLIKRHGGRVTGSISKKTSFLLADEDIGGRKSSKAKELGIPFLTEDGLFDMIRKSKPAK
APVQEEQKKKTLEKVEKSPIKSTPLKVEAKDQVGSVGRKDAAKIVKSSTSPDKPKIQSAD
RSSLTWTVKYRPKVPDDIIGNQSLVKQLHDWLVHWNEQFLHTGQKGKGKKQADSGSKKAV
LLSGSPGIGKSTSAKLVSQMLGFQAIEVNASDNRGKADTKIVKGVGGNTSNSIKELVSNE
ALSCRKNWSKHPKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKS
LVNYCLLLNFRKPTKQQMAKRLKQIADAEGLQVNEIALEELANRVNGDMRMAINQLQYMS
LSQSVINYDDIRQRLLSSSKDEDISPFTAVDKLFGFNGGKLHMEERVDLSMSDPDLIPLI
IQENYINYRPSSIGKDDNGVKRMSLIARAAESIGDGDIVNVQIRRYRQWQLSQAGSFASC
IIPAALMHGHRETLEPGERNYNRFGGWLGKNSTMGKNLRLLEDVHIHILASQEANMNRET
LRVDYFTLLLKQLTDPLRVMPKEEAVQKVVELMDTYSLSQEDFDTIVEMSKFRGHPNPME
GIQPAVKAALTKAYKQGSSSRVVRAADLIALPGLKKAPKKRIAAMLEPVETGLAEENGDA
VAEGEEEYSSDSEDTDDLGINADGGAKPQLDLLSNKPKGVQVELDLKSNGKSKSGAKKTP
AGKSKGSESAEKGPRGSGGGKRKRAA
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcggatataaggaaatggtttatgaagcaacatgacaaggggaacgggactgct
tccaagcctgcggcaaagcctgcgatggctgcttctgagaagccgcctgcacctgtttta
gacaaatcggtgcaaggagctcaagagaattctggtagaagaaaaactagcaagtacttt
gcaactaccactgcaacagaatcaagctctaaaaaaacaacaaaagatgaaaaggtcact
gaaaaatcacctgcaaagaggaaggcccaaaaaattaccgaggattttcaagatgatgtt
aaaccagtgcctgcaaagaagtttcacaaggatgaagatgatgattttgtgccatccaat
gacaggaaaaaggcagctgaggtcaaaccctccaagaaattgaacagtagatcaagtgga
ggaatttctaagaattccgttgataagaatgatgttgattatgatgaagatgagcttgat
gataaatatgttgagactccggttaaagctggtgggagaggcaggggtggaagaggagca
ggagctgctgcaggagggagaggcagaggtggtgggagaggtgggttcatgaattttggt
gagaggaaggatccaccacacaaaggagagaaggaagtaccagagggtgctcctgaatgt
ttagctggtctgacttttgttataagtggcacacttgacagtttggaaagggaagaagca
gaagatctaattaagcgccatggtggtcgggtcactggatctatcagcaaaaaaacaagt
ttccttctagctgatgaagacattggtggaaggaaatcttcaaaagccaaagagttgggt
atcccctttcttactgaggatggattgtttgatatgatccgaaaatcaaagcctgcaaaa
gcacctgtgcaggaagaacaaaagaagaaaactttggagaaggttgagaaatcaccaata
aagagtactccacttaaagttgaagcaaaagatcaagttggttctgtaggaagaaaagat
gctgcaaaaattgttaagtcaagcacctctcctgacaagccaaaaatccaatctgctgac
cgcagttcattgacatggaccgtgaaataccgacctaaggttccagatgacatcattggc
aaccagtcacttgttaagcaacttcatgattggctagtgcattggaatgaacaatttctg
catactggccaaaagggaaagggaaaaaaacaggctgatagtggatccaaaaaagctgta
ctcttaagtggatctcctgggattgggaaaagcacttcagcgaagttagttagtcagatg
cttggatttcaggctattgaggttaatgcaagtgataatcgtggcaaggcagataccaaa
attgttaaaggagttggtggaaatacatcaaattctatcaaagaacttgtcagcaatgaa
gccctaagttgtcgcaagaactggtcaaagcatccaaaatctgtactgatcatggatgag
gttgatggtatgtctgctggagatagaggtggtgttgctgatcttattgctagtataaaa
atatctaaaatcccgatcatttgcatctgtaatgaccgctacagccagaaacttaagagt
cttgtcaactactgcctgctgcttaacttcaggaagcctactaaacagcagatggcaaag
aggttgaagcagattgcagatgctgaaggtcttcaagttaatgagattgcacttgaagaa
cttgcaaacagagtgaatggagatatgcggatggcaataaatcagttgcagtatatgagc
ctctcgcaatcagtaatcaattatgatgatatcagacaacgccttcttagtagttcaaaa
gatgaagatatttcaccctttacagccgttgacaagttatttggtttcaatggtggaaaa
ttgcatatggaagagagggttgacttgagcatgagtgatcctgacctgatccctcttatt
attcaggaaaattatatcaactatcgtccatcttctattggaaaggatgataatggagtc
aaaagaatgagtctgattgcccgggctgctgagtctattggggatggtgacatagtcaat
gttcaaattagaagatatcgccaatggcagctatcccaagctggatcatttgcctcttgc
ataattccggctgctttgatgcatggtcatagggagacccttgaaccgggagagcgaaac
tataatagatttggtggatggttgggaaagaactcaacaatgggaaagaacttgaggctt
ttggaggatgtccatattcatattcttgcttcccaggaagctaatatgaacagggagact
ttgcgggtggattacttcactcttctgctgaaacaactgacagaccctctgcgagtgatg
cctaaggaggaagctgttcagaaggttgtggaattaatggacacttattccctaagtcaa
gaggattttgataccatcgtggagatgtccaaattccggggccatcctaatccaatggaa
ggaattcaacctgcagttaaagccgcattaaccaaggcatataagcaggggagcagctct
cgtgtggtgcgagcagcagacttgattgctcttcctggcctgaagaaggctccaaaaaaa
cgaatagcagcaatgctggagccagtggagactggtttagctgaagaaaatggagatgct
gtggcagaaggtgaagaagagtattcttctgattcagaagatactgatgatcttggaatt
aacgctgatggcggggccaagccacagctggatctccttagcaataaacctaaaggagtt
caagtggagcttgatttgaaaagtaatgggaagtcaaagtcaggtgccaagaagacccct
gcaggcaaatccaaggggtctgagtccgcagagaagggcccccgaggttcaggtggtgga
aagagaaagagggccgcttag
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