Phoenix dactylifera (date palm): 103707521
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Entry
103707521 CDS
T03274
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16 isoform X2
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103707521
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103707521
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Helicases
103707521
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
103707521
NCBI-ProteinID:
XP_008790268
UniProt:
A0A8B7C2H4
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Position
6:complement(17651019..17667483)
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AA seq
598 aa
AA seq
DB search
MGAVANGNGERDGRKEEEEEEEIGFEELGVDPRLIRALSKKSITKPTPIQREAIPLILEG
KDVVARAKTGSGKTFAYLLPMLQKLFSESGSRKTAPRTFILVPTRELCQQVYNEASSLLE
FCRVQLKVVQLTASMPVADMRTALAGPPDIVVSTPACISTCMSKGVLQTSNIKDSLSLLV
LDEADLLLSYGYENDLKTLIPHVPRRCQCLLMSATSSSDVEKLKKLVLHNPVILTLSEAG
HSDDIIPKTVQQFWISCSAHDKLLYILALLKLELIQKKVLIFLNSIDMGYRLKLFLEQFG
INSGVLNAELPQNSRLHILEEFNAGLFDYLIATDDGQTKKEQTSKENHIQSRYSKKKLRQ
KLDAEFGVVRGIDFKNVFTVVNLDMPQSSAGYVHRIGRTGRAYNTGASVSLVSPEEEEIF
EEIKLMFGDDEKQDSSKSIEPFPLLTKNAVESLRYRAEDVAKGVTKVAIREARAQDLRNE
ILNSEKLKSHFEVNPRDLDLLKHDKLLSKKAPSSHLREVPEYLLDPTTKEASKILKLSRA
AMKIDTKKRRPGFKKGFGRSRDPLKTFSAEEKSHKGEKRRKDNDEVIKHKKKKAKQGM
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgggggctgtggccaacggaaacggagagcgagacggcagaaaggaggaggaagaagag
gaggagataggcttcgaagagctgggcgtcgacccccggctgattcgagctttgtcgaag
aagtccatcaccaagccgaccccaatccagcgcgaggccatccccttgatcctggaaggc
aaggatgtcgtggcgcgggccaagacgggctccgggaagacgttcgcctaccttcttccg
atgctgcagaagctcttctccgagagcggttcgagaaagaccgcgccgagaacctttatc
ctcgtgccaacaagggaactctgtcaacaggtttataacgaggcatcatcgctcctcgag
ttctgtagagttcagttgaaagttgtgcaattgacggccagcatgccagttgcagatatg
aggacagcactggctgggccgcctgatattgtggtctccactccagcttgcatttcaaca
tgcatgtcaaaaggtgtccttcagacatcaaacatcaaggattcactttcattgctggtt
cttgatgaggctgacctcctattatcatatggctatgagaatgatttgaaaactcttatt
ccccatgtgccacgacgttgtcaatgcctcctaatgtcagcaacttcaagttctgatgtc
gagaaattgaagaagcttgtgctgcataatcctgtaatcctgaccctatcagaagctggt
cactcagatgacattattccaaaaactgtacaacaattttggatttcatgcagtgctcac
gataagctactctacatccttgctctgttgaagttggagcttattcagaaaaaagtgctt
atatttctcaattccattgacatggggtatagattaaagctatttctagaacagtttggg
ataaattctggagtcttaaatgctgaattgccccaaaattcacgtcttcatattcttgag
gaattcaatgcagggttatttgattatttgatagcaacagatgacggccagacaaagaag
gaacaaacaagtaaggaaaatcacatccagtcaagatattcaaagaaaaagttaagacaa
aaattggatgcagaatttggggtcgtgagaggaatcgacttcaaaaatgtcttcacggta
gtcaatcttgacatgcctcagagctctgctggatatgttcacaggattggtcgcacagga
agagcttataacactggtgcatcggtgtctcttgtttctcctgaagaggaagaaattttt
gaagaaatcaaactcatgtttggagacgatgagaagcaagactcctcaaagtctattgaa
cctttccctttacttactaaaaatgctgtggagtctttacgatatagagctgaggatgtt
gctaaaggtgtaacaaaagttgcgattagagaagcacgagctcaagatctcagaaatgaa
attcttaattctgagaagctgaagtctcattttgaagttaatccaagggacttagattta
ctaaagcatgacaagttactgagcaagaaggctccttcatctcatctacgtgaggtacct
gaatacctccttgatcccacgacaaaagaggccagcaagatactcaagctctcaagagct
gcaatgaagatagataccaaaaaaaggcgtcctggttttaagaaaggatttggtagaagt
agagaccccctcaagactttctctgccgaggagaagtcgcacaaaggtgagaagagaagg
aaggacaatgacgaagtcattaaacataagaaaaagaaggccaaacagggcatgtaa
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