Phoenix dactylifera (date palm): 103707616
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Entry
103707616 CDS
T03274
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103707616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103707616
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103707616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D3
Nrap_D2
Nrap
Nrap_D6
Hypoth_Ymh
Motif
Other DBs
NCBI-GeneID:
103707616
NCBI-ProteinID:
XP_008790387
UniProt:
A0A8B7C2M5
LinkDB
All DBs
Position
6:16172326..16186353
Genome browser
AA seq
1053 aa
AA seq
DB search
MGPETNSMDLKVRELLKEVQLDASAIKSLDGAVSSVIDAIRAIPDQEVSSESTPAFIRDL
RVPSDKVSLTFRSPEHVQVGGSHSIRSIAKPDVNIDLLIRMPKECFHEKDYLNHRYHAKR
LLYLRVVEKSLKSCPVVRKIGWSTFQNEARKPVLLVFPVMEIAEHFEFFIRIIPTATSVF
NVSRLNLTRNNVRAFSQGGVTQATPKYNSSIMEDMFLEENAEFVGKVFLEWKSLEEALIL
LKVWARHRSSIYMHDCLNGYLISVIMSYLTVQSGGNLINKSMNAMQIFRVSLKFIATSSL
FEKGLSLQPLGHGNLSKEDMAQYLQLFSVVICDASGHFNLTFRMTKAAFSALQDEASWTL
DCIDKCRDGGFDEIFMTKVDFAAKFDYCMRINLKGNARVYASDFCLDDECWRICEKDMNS
LIQQALSDRAKLIRVNWRNTPSEWNINDGFSKFSNEPMLVGIMTSSQEKSFRVVDVGPSP
EKKEEAVKFRKFWGEKAELRRFKDGTIAESTVWECEPWERHLIIKIIIEFILTKHFLLLK
EDMVVIVDQLDFCLHLDGKDPTSFSEGLIRAFELLAKRLRLLDDIPLRISSVQPLDPAFR
HTSVLPPEPHPLAYEKGFDKKPPNFTTTCIRPLEVMIQLEGSGNWPLDHVAIEKTKSAFL
LKIGESLQDHWGVFCTASEDEVDVLMSGYAFHLRILHERGLNVSRIQAGNDKVKSALSID
KELFLRSQHSSMINGLHGRFPTYGPVVRLAKRWVSSHLFSSFLAEEAIELVVAYLFLKPF
PFHAPCSRITGFLRFLRLLSNYDWIFSPLIVDINNDFTSKDEKEINENFMLSRKSYEENA
QAVEPAMFLATSYDKASEAWTKFSPNRLVLKRIASYARSSADLLTNLILQGHNGPYTWEC
LFRTPLNNYDAVVLLHRDRLSDPRRLLFPAEINNGKHVIWGKASKDFHPYMPLGGALKSL
EDARNKLLVNFDPIRYLFEDLKREFPGTFNVWCDSLGGDAIGLTWEKKDSKKRGRDEADE
IRRDPTDILREVGEVGKGFVKSVHLLKAPRFQS
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgggtcccgaaacgaactccatggatctcaaggtgagagagctcttgaaggaggtccag
ctcgacgcttccgccatcaaatccctggatggagctgtctcttcggtcatagatgccatc
agagcgatcccagatcaggaggtgagctctgaatccactccggcctttatcagagacctc
cgcgtgccctccgataaggtctccctcacgttccggagcccggagcatgtccaagtcggt
ggcagccactccatccggtctattgcaaaacctgatgtcaatattgatcttctaattcgg
atgcccaaggagtgctttcacgagaaggattacttgaaccatcggtaccatgcaaagaga
ttactttaccttcgtgtggttgagaagagcttaaaatcatgccctgtcgtgaggaagatt
ggatggtcgacctttcagaatgaggcccgaaagcctgttctgttagttttcccagttatg
gagattgctgaacattttgaatttttcattcggataataccaacagctacatctgtgttt
aatgtctcgagattgaatttaacaagaaataacgttcgtgcattcagccaaggtggtgtt
actcaagctactccaaagtacaatagcagtataatggaagacatgtttttggaggaaaat
gcagaatttgtcggaaaagtttttcttgaatggaagagcttggaagaggctttaatttta
cttaaagtttgggctcgacatagaagttccatctacatgcatgattgcttgaatggttac
ttaatatctgtcataatgtcatacctgacagtacaatctgggggaaatcttataaacaag
tcaatgaacgctatgcaaattttccgggtcagcttgaaatttattgcaacttcaagttta
tttgaaaagggcctttctcttcagcctctaggccacggtaacctgtccaaggaggatatg
gctcaatacttgcagctgtttagtgttgttatctgtgatgcatctggccattttaatttg
acattccggatgacaaaggctgctttttctgcgcttcaagatgaggcttcttggacgctc
gattgcatcgacaaatgcagagatggtggatttgatgagattttcatgaccaaggttgat
tttgctgcaaagtttgattactgcatgagaataaacttgaaaggaaatgctagagtttat
gcgtcagacttctgcttggatgatgaatgttggagaatatgtgagaaggacatgaactct
ctaattcaacaagctctaagtgacagagcaaagttaatacgtgtgaactggagaaacaca
ccatctgaatggaatataaatgatggtttctcaaagttcagtaatgaacccatgcttgtc
ggtataatgactagctcccaagagaagagctttcgagtggtagatgtcggtccaagccct
gagaaaaaagaagaggctgtcaaattcagaaaattttggggtgaaaaagcagaactaagg
cgatttaaagatgggaccattgcggagagcacagtgtgggagtgtgagccatgggagaga
catcttattatcaaaataatcattgagtttattcttactaagcattttcttctactgaaa
gaagacatggttgtcatagtagatcagcttgatttttgcctacatcttgatggtaaagat
cccacatcattttctgaaggtctgattagagcttttgagcttttggcgaagcggttacgg
cttctagatgatattcctttgagaatatctagtgtacagccactagatccagctttcagg
cacacatctgtccttcctcctgaacctcatccactggcttatgaaaaaggttttgataag
aaaccaccaaatttcactacaacttgtatccggccgctagaagttatgattcagctagag
ggatcagggaactggcccttggaccatgtagctattgagaagactaaatctgcatttctt
ctaaaaattggagaaagccttcaggatcattggggtgtattttgtactgctagcgaagat
gaggtagatgtgcttatgtctggatatgcatttcatcttagaattctgcatgagagaggc
ttgaatgtgtcaaggatccaagctggaaacgataaagtaaaaagtgctctatctatagac
aaggagttattcctccgaagccagcattctagcatgattaatggtttgcatggccgtttc
cctacgtatggacctgttgttaggcttgcaaaacgttgggtttcttcacatctattttca
tcattcctggctgaggaggcaattgaattggtggttgcatacctctttttgaagccattt
ccatttcatgctccttgctcacggattactggatttttaaggttcttgcggttactgtca
aattatgattggattttctctcccttgattgttgacataaataatgattttacgtcgaag
gatgagaaggagataaatgaaaactttatgttgagcagaaaatcttatgaagaaaatgcc
caagctgttgagccagctatgttcttggccacgtcatatgataaggcatctgaagcttgg
accaagttctcaccaaacagattggtgctcaagcggattgcttcttatgcccgaagcagt
gctgaccttttgaccaatctgatccttcagggtcacaatggcccttacacatgggagtgt
ctgttccggactcctttgaataactatgatgccgtggttcttctccatcgagatagactt
tctgatcctcgacgccttcttttccctgctgagattaataatggaaagcatgtaatttgg
ggaaaagcgagcaaggatttccatccctacatgccacttgggggtgcactgaaaagcttg
gaagatgcaaggaataagctgttggtcaattttgatccaattagatatcttttcgaggac
ctgaagagggagtttccaggcaccttcaatgtgtggtgtgattctcttggaggtgatgca
attggtctgacatgggagaagaaggattcaaagaaacgtggtcgagacgaagctgatgag
attagaagagacccaacagatattctaagagaagttggagaagtgggtaagggatttgtg
aagagtgtgcatcttctcaaggctccaaggttccagagctaa
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