Phoenix dactylifera (date palm): 103707617
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Entry
103707617 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: plant-specific TFIIB-related protein PTF2
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103707617
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
103707617
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF2-like_C_cyclin_rpt
TFIIB
Zn_Ribbon_TF
GDH_C
Motif
Other DBs
NCBI-GeneID:
103707617
NCBI-ProteinID:
XP_008790388
UniProt:
A0A8B7C2M3
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Position
6:complement(16146482..16150343)
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AA seq
543 aa
AA seq
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MDVCGSCGEGRVVVDPDSGARVCGSCGRVLSSDDFRHQTFTSDGVPTGSLMLSVGVFSHR
DRRLLRARTLLADLAARLGLSPARAAEAAALASDVTEGALGDGQWFTVLAAACAYLVMRR
HRLPLSLAEAAAAVGSEVHDLGRMAGRVTHHLRLPPLPEFDAVHSLERTVRTSPSFAGIE
REKAEQIIGQGCFLLQCATKWFLTTGRQPLPMVAAVAAFVAEVNGVKAGIEDIAKEIYAG
VATSKRRLKELMETLVDVARSLLPWGADVTVKNLVQNAPLLIRIMEVKSKSRSVEGSEEE
GLGFDLGDLLNAYHSNPREDSDSKYFNNIGHEEGGHEVMSCVELENLKGLGGMPFECLQK
CLGENGYLKEKGELGKDQGKKRRIAGLDSEALIDSWEGRWDSDKKLTLEQVLQRDVGYDA
LPPSFVTGVKTRKWRKEKIKAAKHRINEVMKPPSSSADSGGKEEDSVLEQMIGRKGGRGR
RKRVKNGGLDWEDCIIELLLLHGVKEDEIEQGHYNTLLALHVFNSSSTQRQTGPENSRVG
DCW
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggatgtctgcggaagctgcggcgagggccgggtggtcgtggacccggactccggcgcc
cgcgtctgtggttcgtgcggccgcgtgctctcctccgatgacttccgccaccagaccttc
acctccgacggcgtccccaccggctccctcatgctctccgtcggagtcttcagccaccgc
gaccgccgcctactccgcgcccgcaccctccttgccgacctcgccgcccgcctcggcctc
tcccccgcccgcgccgccgaggccgccgccctcgcctccgatgtcaccgaaggcgcgctc
ggcgacggccagtggttcaccgtccttgccgccgcttgtgcctacctcgtcatgcgccgc
catcgcctccccctctccctcgccgaggccgccgccgccgtcggctccgaagttcacgac
ctcggccggatggccggccgcgtcacccaccacctccgccttcccccgcttccggagttc
gacgccgtccactccctcgagcgcactgtccgcacctcccccagcttcgccgggatcgag
agggaaaaggccgagcagatcatcggccaggggtgcttcctcctccagtgcgccaccaag
tggttcctcaccactgggcggcagccactcccgatggtcgccgccgtagcggcgtttgtg
gcggaggtgaacggggtgaaggccgggattgaggacattgccaaggagatctacgccggg
gtcgccaccagcaagcgccggctcaaggagctcatggagaccctcgtcgatgtcgcaagg
tccttgcttccctggggcgcagacgtcaccgtcaagaacctagtgcaaaatgcgcccctt
ttgatccggatcatggaggtgaagtccaaatccagatcggtggaagggtcggaggaggag
ggccttggattcgatttgggtgatctcctgaatgcctatcattcaaacccgagggaggat
agtgattccaagtatttcaacaatataggtcatgaagagggtggtcatgaggtgatgagc
tgcgttgagttggagaacctaaaaggtctcgggggaatgccttttgaatgcttacaaaaa
tgtcttggagagaatggctatcttaaggaaaagggagagcttgggaaggaccaggggaag
aagaggaggatagctggattggattcggaggcattaattgattcgtgggagggaagatgg
gattccgacaagaagctgacgcttgagcaagtattacagcgtgatgtcggttatgatgct
ctgcctccatcttttgttactggtgtcaaaaccaggaaatggagaaaagagaagataaaa
gctgctaagcatcggattaatgaggttatgaagcctccatcatcctctgccgattcgggt
gggaaggaagaggattctgttttggagcagatgataggtaggaagggggggagggggagg
aggaagagagttaaaaatggtggtcttgattgggaggactgcataattgaacttttactt
ctccatggagttaaagaggatgaaatagagcaaggccactataatacgttgctggccttg
catgttttcaattcctcgagtactcagagacaaacaggaccagaaaattccagggttggg
gactgctggtga
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