KEGG   Phoenix dactylifera (date palm): 103707790
Entry
103707790         CDS       T03274                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5 isoform X1
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103707790
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pda03021]
    103707790
   03036 Chromosome and associated proteins [BR:pda03036]
    103707790
Transcription machinery [BR:pda03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103707790
   Coactivators
    SAGA/TFTC/STAGA complex
     103707790
Chromosome and associated proteins [BR:pda03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103707790
    STAGA complex
     103707790
    TFTC complex
     103707790
    SAGA complex
     103707790
    SLIK complex
     103707790
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_EML Beta-prop_IFT122_1st Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Beta-prop_WDR41 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_Vps41 Ge1_WD40 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_IP5PC_F LisH_PAC1 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_Nup120_160 LisH WD_LRWD1 Beta-prop_ACSF4 PALB2_WD40
Other DBs
NCBI-GeneID: 103707790
NCBI-ProteinID: XP_008790668
UniProt: A0A8B7C329
LinkDB
Position
7:10296138..10342345
AA seq 664 aa
MEEEELQKAVYAYLRKKGFRQTELALQEEQNRLSSSAQSDLAVSRLDNDPARYHDAYSKL
RSWAYSSLDLYKHELLRVLYPVYIHCFMDLVAEGHMQEARTFFHTFREDHELTHLRDLQK
LEGILSPSHLEEMELARSLRQNKVKIKLCEYSYDLLLQYLQKTQSFTMLGIINEHINFEV
SAGQPSSISDDADVVALVGSSQDIAKHINQKEVRWGLLEDSVEERLERALSDSEKAEGEN
KEVDPEDSKQKRSVEGAKQGVSVKKLKKDKLVGATGKNIRSETSTVSMAPRVKPELTLPV
MTTEVEQSILEDLRNRVQLSSLALPSISFYTFINTHNSLNCSSISHDGSLVAGGFSDSSL
KVWDMAKIGRPTKTFTEQQPSANLQGESESVQNEHLLGPEERKRSYTLFQGHAGPVYSAT
FSPFGDFLLSSSSDSTIRLWSTKLNSNLVCYKGHNYPVWDVQFSPVGHYFASCSHDRTAR
IWSMDRIQPLRIMAGHLSDVDCVQWHANCNYIATGSSDKTVRLWDVQSGECVRVFIGHRS
MVLSLAMSLDGRYMASGDEDGTIMMWDLSSGRCVSPLMGHSSCIWTLAFSCEGTLLASGS
ADCTVKLWDVTASMKVPRMEENKASSTNRLRLLKALPTKSTPVYTLRFSRRNLLFAAGAL
SKQV
NT seq 1995 nt   +upstreamnt  +downstreamnt
atggaggaggaggagctccagaaggccgtgtacgcttatctgaggaagaaaggcttcagg
cagactgagctcgcccttcaagaagagcagaaccgcctttcctcctccgctcagtccgat
ctcgctgtctccagattagacaatgatcctgcaagataccatgatgcgtatagcaagcta
agatcgtgggcatatagttcattggatttgtacaagcatgagcttctccgtgtgctctat
ccagtttatatacactgcttcatggatcttgtggcagaagggcatatgcaggaagctcgt
acattttttcatacttttcgtgaagaccatgaactgacgcatttacgggaccttcaaaag
ctggaaggcattctctcaccctcacatttggaggagatggagcttgctcgttctttgagg
caaaacaaagtcaaaataaaactgtgtgagtattcctacgacctcctgctgcaatacctt
cagaagacacaatcctttaccatgcttgggataatcaatgaacatataaattttgaagta
tctgctgggcagccttcctcaatttctgatgatgcggatgttgtagccttagtggggagt
agccaggacatagctaaacacattaatcagaaggaagtacgttgggggttgcttgaagat
tcagttgaagaacgtttggagagagcactttcagactctgagaaggctgagggtgaaaac
aaagaggtggacccagaagatagcaagcagaaaaggtctgtggagggagcaaaacaaggt
gtttctgtcaagaagttgaaaaaggacaagcttgttggtgcaacggggaaaaacatccgc
tctgagacaagcacagtctccatggctcctcgagtgaaaccagagcttactctacctgtg
atgactactgaagtagaacaatctattctcgaggacttaagaaatcgggtgcaattaagt
agcttggcattaccttctatcagcttctataccttcattaatacacataacagtttaaat
tgttcatctatttctcatgatgggtcattggttgctggtggattttccgactcttctctg
aaggtttgggacatggcaaagattggtcgacccaccaaaacctttaccgaacaacaacct
tcagccaatttgcagggggaaagtgaatctgttcaaaatgagcatttgctggggccggag
gagaggaaaagatcttacacattgtttcagggtcatgctggacctgtttattcagctaca
tttagtccttttggggattttcttttgtcttcatcatcagattcaacaatccggttatgg
agtaccaaactgaattcaaatcttgtctgctacaaaggtcataattaccctgtgtgggat
gttcaatttagtcctgttggccattattttgctagttgttcacatgatcggactgctaga
atttggtcgatggacagaatccaacctctgcgaataatggctggacatctttctgatgtt
gattgtgtacaatggcatgccaattgtaattacattgcaaccggatcaagcgacaaaact
gtcagactttgggatgtacaaagtggggaatgtgtacgtgttttcattggtcataggagc
atggtattgtcattggcaatgtctcttgacggacgatatatggcttctggtgatgaagat
ggtaccatcatgatgtgggatctctcaagcggtcggtgtgtttcaccattaatgggacat
agctcctgtatatggacacttgcttttagttgtgaggggacattgcttgcttctggatct
gctgactgtactgttaaattatgggatgtgaccgccagcatgaaggtgccaaggatggag
gagaacaaagctagcagcacgaaccgactgagattgttgaaggctctcccgaccaagtct
actcctgtctacacattacggttctctcggaggaatcttttgtttgctgctggggcactt
tcaaaacaggtgtga

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