Phoenix dactylifera (date palm): 103708005
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Entry
103708005 CDS
T03274
Name
(RefSeq) RNA-binding protein Y14A-like
KO
K12876
RNA-binding protein 8A
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03013
Nucleocytoplasmic transport
pda03015
mRNA surveillance pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103708005
09122 Translation
03013 Nucleocytoplasmic transport
103708005
03015 mRNA surveillance pathway
103708005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103708005
03041 Spliceosome [BR:
pda03041
]
103708005
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103708005
Spliceosome [BR:
pda03041
]
Complex C
Other components
EJC/TREX
103708005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
Motif
Other DBs
NCBI-GeneID:
103708005
NCBI-ProteinID:
XP_008790974
UniProt:
A0A8B7C3J5
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All DBs
Position
3:complement(13537477..13547990)
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AA seq
202 aa
AA seq
DB search
MAANAADVEVVDFEPDDDDLMDEDGAAEVDAAPSHHKLRSAITGGDLSADSKKTKGRGFR
EEAAAATAERNSRFAFRDFESLDSDGGPGPQRSIEGWIILVTGVHEEAQEDDLHNAFREF
GLVKNLHLNLDRRTGFVKGYALIEYETFKEALDAIKALNGTELLTQTIYVDWAFSNGPFR
RRNARRRSPRVHRSRSPPRRRY
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaacgcggcggacgtggaggtggtggacttcgagccggacgacgatgatctc
atggacgaggacggcgccgccgaggtcgacgccgccccttcccaccacaaactccgctcc
gccatcaccggcggcgatctctccgccgactccaagaagaccaaaggccgcggcttccgg
gaggaggccgccgccgccaccgccgagcgcaacagccgcttcgccttccgggacttcgag
tcgctcgactccgacggcggccccggcccccaaagatctattgagggatggattatactg
gtcactggagttcatgaggaggctcaagaagatgatctccataatgcttttcgggaattt
gggctggtcaagaatttgcatctaaatctagaccgtcgtactggatttgtcaaggggtat
gcgctaattgaatatgagacattcaaggaagcactagatgcaatcaaagcactgaatgga
actgagcttctcacacaaactatttatgttgactgggcatttagcaatggcccattcagg
cgcagaaatgcgaggaggagatcaccacgtgtgcaccgttcaaggagcccacctaggcgg
aggtattga
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