Phoenix dactylifera (date palm): 103708064
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Entry
103708064 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II C-terminal domain phosphatase-like 3
KO
K18999
RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:
3.1.3.16
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pda01009
]
103708064
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103708064
Enzymes [BR:
pda01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
103708064
Protein phosphatases and associated proteins [BR:
pda01009
]
HAD phosphatases
Fcp/Scp phosphatases
103708064
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
103708064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
PTCB-BRCT
RTT107_BRCT_5
BRCT_2
Motif
Other DBs
NCBI-GeneID:
103708064
NCBI-ProteinID:
XP_038989866
UniProt:
A0A8B9ASU1
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Position
14:5866952..5873585
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AA seq
1196 aa
AA seq
DB search
MRVAGSSRFFLNPSEKETLTWMARDRPRGGANRAGEGEISDGDSSASLEEISAEDFKQDA
RDPPGSKVWVGYPMSRNYAPNLYSFAWAQAVQKQASWFGFESRWARPIPRRRAPAASRIG
GREIGFGSEPVGGEIIDLSSDKQEDGSESEEKKLLGGKETEEIGEFDRRVSLILEELETV
TEEEAEKSFDGVCLATASVFXNLKPMFAETESPVPVLDALVQQAFEGIKTVHSVLRSENL
KKKEQNKDFLLRLLIHIKNQYSNILSPEQVKEIDTRVQSLVFEDDSNKESKLYAGSGTNT
NDKTHLPEKPDISSFGLVSSGNSHVVSSIGSKNVQAGLPKLDTPTISRGRIVSPLLDLHA
EYDEESLPSPTRENAPPLPIHKPIGFGTGTVVFTEPITTKNVEAEDDTPHPYITDAFKAV
SSYQQKYFFTSNKLPSPTPSEECDDKDDAHDEVSSSSANGNAGCVNTTSEIQVATNSAAC
TDSSSRHQPGPVKPVGQLGSAPNPAIRPALKSRDPRLRFVNSESGNASDPNRRAMSLDFS
APNNDLVGGITNPRKHKAVDESFPENHTLKRQKNGLTNSSDVQMTPGRGGGWLEDSSSVR
SQLSDKIRLNENMEIEIKNPGSVVMSDRRPDSNPNIQVTNTGTCMIPSSTTAPSSSTAPS
SSAAASVSFPSLLKDIAVNPTMLMQLIQIEQQRLSAEAQQKTVGLMHNMAHASSLNVLPG
AVSSANVASMKSAEVGSQIHPEDLKNSQSDVGRIRMKPRDPRRILHNMVQRMRPXFQNEQ
NQMEHSPSDPQSSKDHLAIGEQGEQAQAIGLPTLQLAKNPKNLGIFLLLCNWQHNSCYTI
NPNAWGDVDHLLDGYDDQQKAAIQRERARRIAEQNKMFAARXLCLVLDLDHTLLIQPRYI
FXIPVHEEILRKKEEQDREKPQQRHXFRFQHMGMWTKLRPGIWNFLEKASKLYEMHLYTM
GNKLYATEMAKVLDPTGTLFAGRVISRGDDSEPFDGDERVPKSKDLDGVLGMESAVVIID
DSVRVWPHNKLNLIVVERYTYFPCSRRQFGLFGPSLLEIDHDERPEDGTLASSLTVIERI
HDDFFSHRSLNDVDVRNILAAEQRKILAGCKIVFSRVFPVGEANPHLHPLWQMAEQFGAA
CTNQIDEQVTHVVANSLGTDKVNWALSTGRFVVHPSWVEASALLYRGVNEQDFAVK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcgccggatctagtcgatttttcttgaatcctagcgagaaggaaaccctaact
tggatggcgagggaccggccccgcggcggcgcgaaccgggcgggggagggtgagatctcc
gacggtgactcgtcggcgtcgctggaggagatctctgcagaggacttcaagcaggacgcc
cgggatcccccgggatccaaggtctgggtgggttaccccatgtcgaggaactacgcccca
aatctctatagcttcgcgtgggcgcaggccgtgcagaaacaagcctcttggtttggattt
gaaagccggtgggctcggccgatcccccggcgaagagcgccggcggcaagccgaattgga
ggaagggagattgggttcgggtcagagccggtaggcggcgaaattatcgatctttcgtct
gataaacaggaggacggctcggaatcagaagagaagaagctattgggtgggaaagaaaca
gaagagattggggaatttgataggcgtgtaagcttaattctagaggagttagagactgta
actgaagaagaggcggagaaatcatttgacggtgtctgtttggcgactgcgtcagtcttt
tgaaatttgaagccaatgtttgcggagacagagagccctgttccggtgctagatgctctt
gttcagcaggcatttgaaggaattaaaacagtccattctgtgcttaggtccgagaattta
aagaaaaaggagcagaataaagattttcttctgaggttgttaatccacataaagaaccaa
tactctaatattttatcacctgagcaggtgaaagagatagataccagagtgcagtcattg
gtttttgaggatgatagcaacaaagagagcaagttatatgctgggagtggcaccaataca
aatgataaaactcatctacctgaaaagcctgatatctcttcttttggtttggtttcatct
gggaactcacatgtggtcagttctataggcagcaaaaatgttcaggctggtctgcctaag
ttagatacacctaccatctcgagaggtagaatagtgagtccattgctggatcttcatgca
gaatatgatgaagaaagccttccctcgcccacacgcgagaatgcaccaccattgcctata
cataaaccaattggttttggaactgggacagttgtattcactgagccaataactaccaag
aatgtcgaagctgaagatgatactccacatccctacataacagatgccttcaaggctgtt
tcatcctaccagcagaagtattttttcacaagtaacaagctcccaagcccaacaccttct
gaggagtgtgatgataaagacgatgctcacgatgaagtctctagttcttcagccaatggt
aatgctggatgtgtgaatacaaccagtgagattcaggttgctaccaacagtgctgcttgt
acagatagctcaagtagacatcagccaggtcctgttaaaccagttgggcagttgggttca
gcaccaaaccctgctataaggcctgctttgaagagcagagacccaaggcttaggtttgtt
aactctgaaagtggaaatgcttcagatcctaacagacgagcgatgtctttggactttagt
gctccaaataatgaccttgttggaggaataaccaatcctaggaagcataaggctgtggat
gagtcttttcctgagaatcataccttgaaaagacaaaaaaatgggcttacaaattcatct
gatgtgcagatgacgccaggaagaggaggtgggtggttagaagacagcagttcggtgcgc
tctcaactgagtgacaagattcgattaaatgaaaacatggaaattgagattaagaatcca
ggaagtgtagtcatgtctgacagaagaccggattctaaccctaacatccaggtaacaaat
actggaacttgcatgataccatctagtaccactgccccatctagtagcactgctccatct
agcagtgctgctgcttctgtttcttttccttctttattgaaggacattgctgtaaaccct
acaatgcttatgcaactaattcaaatagaacaacaaagattatcagcagaggcacagcag
aaaactgttggtttgatgcataatatggcacatgcttcaagtctcaatgtattacctgga
gctgtttcttcagcaaatgttgcttctatgaagtctgcagaagttgggtcacaaatccat
ccggaagacctcaagaattctcagagtgatgtaggaagaattcgtatgaaacctcgtgac
cctcgccggattctacataatatggtccagagaatgagaccatagtttcagaacgagcaa
aaccaaatggaacactctccatcggatcctcagagtagcaaggaccatttagcaattgga
gagcagggagagcaggcgcaggccattggtttgcctactctgcagcttgctaagaatccc
aagaatctagggatatttcttctcctttgcaattggcagcacaacagttgctacacaatc
aacccaaacgcatggggagatgttgaccatctactggatgggtatgatgatcaacagaaa
gccgccatccaaagagagagggcaagaaggatagcagaacaaaataagatgtttgctgct
cggnagctttgtcttgtccttgatctggatcacacactcctaattcagccaaggtatata
ttttagatcccagttcatgaagaaattttaagaaagaaagaagagcaagaccgagagaag
ccacaacaacggcatnctttccgcttccagcacatgggaatgtggaccaagttgaggcca
ggaatttggaattttctggagaaggctagtaagctctatgaaatgcatctatacacaatg
ggaaacaagttatatgctaccgaaatggcaaaggtgcttgatccaacaggaactttgttt
gctggccgagtgatctcaagaggagatgacagcgagccttttgatggtgatgagagggta
cccaaaagcaaggatctagatggggttttgggtatggaatcagctgtcgtgatcattgat
gattctgtgagggtctggcctcataacaaactcaacttgattgttgtagagagatatact
tactttccctgtagtagacgacaatttggactatttgggccttcactccttgagattgat
catgatgagaggccagaagatgggacccttgcttcttcgttaacggtcatcgagcgaatt
cacgacgacttcttctctcatcgctctctaaatgatgtggatgttagaaacatacttgca
gccgagcagcgtaagatcctcgcaggatgtaagatagttttcagccgggttttcccggtg
ggggaagccaatccccatttgcatccgctgtggcagatggctgagcagtttggtgctgcg
tgcaccaaccagattgatgaacaggtcactcacgttgttgccaattctcttggaactgac
aaggtgaattgggctctttccacaggaagatttgtcgtccatcctagctgggtggaagct
tcagctcttctgtatcggggcgtgaacgagcaggactttgctgttaaataa
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