Phoenix dactylifera (date palm): 103708444
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Entry
103708444 CDS
T03274
Name
(RefSeq) pre-mRNA-splicing factor SLU7-like isoform X1
KO
K12819
pre-mRNA-processing factor SLU7
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103708444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103708444
Spliceosome [BR:
pda03041
]
Complex C
Other components
Step II factors
103708444
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Slu7
zf-CCHC_4
Tudor_3
Motif
Other DBs
NCBI-GeneID:
103708444
NCBI-ProteinID:
XP_008791595
UniProt:
A0A8B7C4I5
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Position
2:853264..860559
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AA seq
536 aa
AA seq
DB search
MATASASFKSREDHRKQLELEEARKAGLAPAEVDEDGKEINPHIPQYMSSAPWYLNAEKP
SLKHQRKWKSDPNYTKSWYDRGAKIYQANKYRKGACENCGAMTHDKKLCMERPRKVGAKW
TNMHIAPDEKVETFELDYDGKRDRWNGYDPSTYARVIEQYEAREAARRKYLKEQQLKKLE
EKNNNQNGEGAVSDEDDDEDELKVDEAKVDESKQMDFAKVEKRVRTTGGGSTGTVRNLRI
REDTAKYLLNLDVNSAHYDPKTRSMREDPLPDADPNEKFYEGDNQNRISGQALDFKQLNM
HAWEAFEKGQDIHLQAAPSQAELLFQNYKIIKEKLKSKMKDTIMEKYGNAASEEALPREL
LLGQSEREIEYDRAGRIIKGQETSLPRSKYEEDVFINNHTSVWGSWWKDHQWGYKCCKQT
IRNSYCTGSAGIEAAEAAAELMKANIARKEATEEKPIQHEEKRLATWGTDVPDDLVLDKK
LLAEALKKEDERKKEERDERKRKYNVKWNDEVTPEEMEAYRMKKIHHHDPIKDFLH
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcttcggcatcgtttaaatcccgagaagaccatcgaaaacaacttgagttg
gaagaagcacgtaaggctgggcttgccccagctgaggttgatgaagatggaaaggaaatt
aatccacacattcctcaatacatgtcatctgcaccttggtatcttaatgctgagaagcct
agtttgaagcatcagaggaaatggaagtcagatccaaattacacaaaatcatggtatgac
agaggtgcaaaaatttatcaggctaataaatatagaaagggtgcttgtgaaaattgtggg
gcaatgactcatgataagaagttatgcatggagagaccacggaaggtgggagcaaagtgg
actaacatgcatatagctccagatgagaaagtggagacatttgaacttgattatgatgga
aaacgtgaccgttggaatggctatgatccatcaacttatgctcgtgtaatcgagcaatat
gaagctagggaggcagcgaggcggaaatatctaaaagaacagcaactgaaaaagctggag
gagaaaaacaacaatcagaatggcgaaggtgcagttagtgatgaggatgatgacgaagat
gagctaaaggtagatgaggcaaaggttgatgagagcaaacagatggactttgcaaaagtg
gagaaacgtgtacgcaccacaggtggtggaagcactggaacagtcaggaatttgcgtatt
agggaggatactgcaaagtaccttctgaatttagatgtcaattcagcccactatgatcca
aaaacccgttccatgcgtgaggatcctttaccagatgccgatccaaatgagaaattttac
gaaggtgataaccaaaacagaattagcggacaagcactcgacttcaagcagctgaatatg
catgcttgggaagcttttgagaaagggcaggatatccacctgcaagctgccccctctcaa
gcagaattactttttcagaattataagattattaaagagaagttgaaatcaaaaatgaag
gataccattatggagaaatatggaaatgcagcatccgaagaggcacttccaagggaactt
cttcttgggcaaagtgagagagagattgagtatgaccgtgctggtcgaataataaagggc
caggagacctcactgccaagaagcaagtatgaagaagatgtattcataaataaccatacc
agtgtttggggttcatggtggaaggatcaccagtggggctacaaatgctgcaaacagaca
attcgtaacagctactgcacagggtcagctggaattgaggctgctgaagctgctgcagaa
cttatgaaggcaaacattgctcgtaaggaggccacagaagagaaacccatacagcatgag
gagaagcggctggctacttggggaactgatgtccctgatgacctggttcttgataaaaaa
ttgcttgcagaagctctgaagaaggaggatgaaagaaagaaggaagaaagggatgaaaga
aagcggaaatacaatgtgaagtggaatgacgaggtcactccggaagaaatggaagcctat
cgaatgaagaagatccatcatcatgatccaatcaaagatttcctccactaa
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