Phoenix dactylifera (date palm): 103708627
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Entry
103708627 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103708627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103708627
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103708627
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103708627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
DUF4729
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103708627
NCBI-ProteinID:
XP_008791866
UniProt:
A0A8B7C4V4
LinkDB
All DBs
Position
8:complement(27172733..27198637)
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AA seq
299 aa
AA seq
DB search
MFMADATVSDYDLSTETMDLEQTVKPKKVTFALGVKLRVLSTRGVLDLFQCPVCSCSMYP
PILQCSNGHTLCSKCKHRVNNRCPSCYHEINNIRCLALERIAQSLDFPCSYQSHGCHEIF
PYYDKLRHELQCKFRPYDCPCAGSRCSVTGDISTLLAHLTNDHKVDLHVGCTFNHRYVKS
NPLEVQNATWMLTVFNCFDKHFCLHFEAFELGTEPMYMAFLLFMGEEDEAKDFSYSLEVG
GNHRKLIWQGVPRSIRDSHRRVRDSHDGLLIPRNLALFFSGGDQQELKLRVMGRIWKEP
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgttcatggccgatgccacagtttctgattatgatctatcaactgaaactatggatctt
gaacagactgtcaaaccaaagaaggtcacctttgcattgggtgtcaagctaagagtgctt
tcgaccagaggtgtgctagacctattccagtgccctgtttgctcatgctcaatgtaccct
cccatccttcagtgctcaaatggccatactctttgttcaaagtgcaagcatagagtgaac
aatcgctgcccatcttgctatcatgagattaacaatatacggtgcctagctttggagagg
atagcacaatcattggatttcccttgcagctaccagtctcatggttgccatgaaatattc
ccctactatgacaagctcagacatgaacttcagtgcaaattccgtccatatgactgccct
tgtgctggatctcggtgctctgtcaccggagacatctcaaccctcctggcccatctcaca
aatgatcacaaggttgatttgcatgttgggtgcaccttcaatcatcgatatgttaaatcc
aacccacttgaggttcaaaatgcaacatggatgctgacggtcttcaattgttttgacaag
catttctgcttgcattttgaggccttcgaactagggaccgagcccatgtacatggcattc
ctgctgttcatgggagaggaagacgaggcaaaggacttcagttacagcctagaggtaggt
gggaatcaccggaaacttatttggcagggagtcccaagaagcatccgtgatagccacagg
agggttcgtgatagccacgatgggctgctcatccccaggaatctggcactcttcttctct
ggcggtgatcaacaggagctgaagctcagagtaatgggcaggatatggaaagaaccttaa
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