Phoenix dactylifera (date palm): 103708715
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Entry
103708715 CDS
T03274
Name
(RefSeq) 25S rRNA (cytosine-C(5))-methyltransferase nop2-like
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103708715
Enzymes [BR:
pda01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
103708715
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103708715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
Methyltr_RsmF_N
RsmF-B_ferredox
Methyltransf_31
FtsJ
Motif
Other DBs
NCBI-GeneID:
103708715
NCBI-ProteinID:
XP_038978407
UniProt:
A0A8B8ZYF9
LinkDB
All DBs
Position
Unknown
AA seq
672 aa
AA seq
DB search
NHVHGTCNVLVDPFFLPLPRPIPFYGFPLYVVNPRVYSFLPRNFSTVPLFAALSSFPLNA
DGFSEAAGGCETPKPNSKKNKKPQEKDEEERDLLSSKPVHDVEPLDGDSGPEDEEEENGS
QGSDLEDELSRSDVSSDGDPFTDDFLGGSDNEEGEEARSESDESDLEAKSRAIDEARARA
EAEAEEELRLNIKEESDEFRLPMTEELEEEARQPPNLPNLQRRIKEIVRVLTNFKTLRQE
GTCRKNYIGQLKADIMSYYGYNEFLADGFIEMFSAVELIELLEAFEKNRPECLRTNTLKT
RRRDLAGVLINRGVNLDPIGKWSKVGLVVYESQVPTGATPEYLAGHYMRQAANSFLPVMA
LAPQEKERIVDMAAAPGGKTTYIAALMKNSGIIYANEYKEPRLKSLLANIHRMGVTNTVV
CNYDGKELSKVLGLNSVDRVLLDAPCTGIGTICPEQQSIKTSKSIEDVQNCAFLQKQLIL
AAIDLVDANSKSGGYIVYSTCSVMIPENEAVIDYALKKRDVKLVPCGLDFGRPGFIRFRD
QRFHPSLEKTRRFYPHVNNMEGFFVAKLKKLSNSKPAASEAPKTSEKTEEAAVTDDNTDV
QTDVPNGKPEKLKILKKGKGKKKSGSKRGTPNEGKVSPTSKAKLRKKRKFPSREEISQAR
EEKRKALKKRKV
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
aatcacgtgcacggcacgtgcaatgttctcgtggaccccttttttttacccctccctcgt
cccatccctttttatggttttccgctatatgtcgtaaaccctagggtttattcttttctt
ccccgaaacttttcgactgttcctctctttgccgccctctcctcattcccgctgaacgcc
gatggcttctcggaagcagcaggtggctgcgaaaccccgaagccaaattcgaagaagaac
aagaagccgcaggagaaggacgaggaggagagagacctcctctcttccaaacctgtccat
gacgtcgaacccctcgacggcgattccggccccgaggacgaggaggaagaaaatggcagc
caagggtccgacctcgaagacgagctatctcgatcggacgtctcctccgatggggacccc
ttcaccgatgacttcctaggaggcagcgacaatgaggaaggagaggaggcgaggtcggag
tcggacgagtctgatttagaggcgaagtcaagagcgattgatgaggcaagggcgagggca
gaggcggaggcagaagaggaattgaggctcaatattaaagaagagtcggatgagttcaga
ttgccgatgacagaggagctcgaagaagaagctcgtcaaccgccgaatcttccgaatctt
cagcggaggataaaagagattgttcgtgttctcacgaacttcaagactctgaggcaggag
gggacctgtcggaagaattacattggccagctcaaggcggacataatgtcttattatggc
tacaatgagtttcttgccgatggttttattgagatgttctcggctgttgagctcattgaa
ctgttggaggcttttgaaaagaatcgacctgaatgcttgcgtacaaacactttaaagact
cgtaggcgggatcttgctggtgttctaataaatagaggggtcaatctagatccaataggg
aagtggtcaaaggttgggcttgtggtatatgagtcacaagtgcctactggtgcaactcct
gaatatctggccgggcactacatgagacaagctgcaaattcttttttacctgtcatggcg
cttgctcctcaagaaaaggaacgaattgttgatatggcggctgctccaggaggtaagacg
acgtacattgcagctcttatgaagaattctggaataatttatgcaaatgagtacaaggaa
ccaaggcttaagtcactgctagcaaatatacatcgtatgggtgtgacaaacactgtagtg
tgcaactatgatgggaaggagctatcgaaggttcttgggttaaattctgttgatagagta
ttactggatgccccctgcaccggcattggaactatctgcccagagcaacaatctattaaa
acatccaagtccattgaagatgtacaaaattgtgctttcctgcaaaagcaactgatttta
gcagcaattgatttagtggatgctaattcaaaatcaggggggtacatagtttactcaact
tgttctgtgatgattcctgagaatgaagcagttatagactatgcactcaaaaagagagat
gtaaagcttgtgccatgtggattggactttggtcgcccaggattcattcgctttagggat
cagcggtttcatccttctttagaaaaaacaaggcggttttatccccatgtaaacaacatg
gaaggcttttttgtggccaagctgaagaagctaagcaattccaaaccagcagcttcagaa
gctcctaagacatcagaaaaaacagaagaggcagcagttactgatgacaatacggatgta
cagactgatgtcccaaatggaaaacctgaaaagctaaaaattttgaaaaagggtaaagga
aagaaaaagagtggttctaaaaggggaaccccaaatgaaggaaaggtatcacctacatcc
aaagccaagctgaggaaaaaacggaaatttccttctagagaggaaatttcccaagctaga
gaggagaaacggaaagccttgaagaagagaaaggtctga
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