Entry |
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Name |
(RefSeq) LOW QUALITY PROTEIN: protein argonaute PNH1-like
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KO |
K11593 | eukaryotic translation initiation factor 2C |
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Organism |
pda Phoenix dactylifera (date palm)
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Brite |
KEGG Orthology (KO) [BR:pda00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pda03019]
103708817
03036 Chromosome and associated proteins [BR:pda03036]
103708817
Messenger RNA biogenesis [BR:pda03019]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103708817
Chromosome and associated proteins [BR:pda03036]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103708817
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
103708817
microRNA pathway
RISC loading complex
103708817
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
8:3843655..3858154
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AA seq |
970 aa
MLAVVERDSSFRALPSPSPSPSPSPSCEMPLRHLAKDPARGEKHVVSKKPFQNSINHHQQ
QQQLESHTSLPVATKKSAGRRRGRGRAKVAAESPLAKPEMETGVNAGPPVSSRGIGFHRR
PGFCQVGTKCIVKANHFLAELPDKDLIQYDVTIAPEVASRSMNRAIMAELVRLYRETELG
MRLPAYDGRKSLYTAGFLPFNSKEFTVKIAEEDDGIGVTREKEYKVAIRFVARADLHHLR
QFIAGKQADAPQEALQVLDIVLRELSSQRYISIGRSFYSPDIRKPHRLGDGLQSWCGFYQ
SIRPTQMGLSLNIDMSSTAFIEPLPVIEFVAQILGKDVLSRPLSDADRIKIKKALRGVKV
EVTHRGNVRRKYRISGLTSQPTRELIFPVDDQMNMKSVVEYFKEMYGFTIQYSHLPCLQV
GNQKKANYLPMEACKIVEGQRYTKRLNEKQITSLLKVTCQRPREQELDILQTVHQNGYEQ
DPYAKEFGINISDRLTSVEARVLPAPWLKYHDTGKEKECLPQIGQWNMMNKKVINGGTVN
HWACINFSRGVQESTARGFCQELAQMCQISGMEFNHEPVIPIYSARPEQVEKALKHVYNA
AMNKLKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCCLTKHVFKVSKQYLANVS
LKINVKMGGRNTVLLDAISWRIPLVSDTPTIIFGADVTHPETGEDSSPSIAAVVASQDWP
EVTKYAGLVCAQAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFY
RDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTD
RSGNILPGTVVDSKICHPNEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNN
LCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEISESSASRSTRTANGSSVRPLPALK
EKVKRVMFYC |
NT seq |
2913 nt +upstreamnt +downstreamnt
atgctcgcagtggtagagagagacagcagcttccgcgccttgccttcgccttcgccttcc
ccttccccttcgccctcctgcgagatgcccctccgccacctggccaaggaccccgccagg
ggggagaagcacgtcgtctccaagaagcccttccagaactccatcaaccaccaccagcag
cagcagcagctcgaaagccacacctcgttgccggtcgctaccaagaaaagcgccgggagg
cggcggggaagagggagagccaaggtcgcggcggagagtcccctggcgaagccggagatg
gagactggcgttaatgccggaccgcctgtttccagcagaggcatcgggttccaccgccgg
cctgggttctgccaggtgggcaccaagtgcattgttaaggccaaccacttcctcgcagag
ctgccggacaaggaccttatccagtatgatgttacgatcgcgccggaggtggcctcccga
agtatgaacagagctatcatggcagagttggtcagactctatagagagacggagttgggg
atgcggcttccggcttacgatggcaggaagagcctttacacggccggatttctgcccttt
aattccaaggagtttactgtgaagatcgcggaggaggatgatggaataggagttacgagg
gaaaaagaatataaggtggcgatcaggtttgtagctcgagcggaccttcaccatctgcgt
cagttcatagctggaaagcaggctgatgctcctcaggaagctcttcaggttcttgatatt
gtcctaagggaattatcgagtcaaaggtacatatctattgggagatccttctattctcct
gatatcagaaaaccacataggctcggtgatggattacagtcatggtgtggcttctaccag
agtatcaggccaactcagatgggcctctctctgaatattgatatgtcctccactgctttt
atcgagccactccctgtgattgagtttgtcgctcagatcttgggcaaagatgtgctatca
cgaccattgtcagacgctgatcgtatcaagatcaaaaaggcgcttagaggtgtgaaagtt
gaagtcactcacagaggaaatgtgcggcggaaatatcgaatttcagggctgacatcacaa
ccgactcgcgagttaatttttcctgttgatgatcaaatgaacatgaaatctgttgttgaa
tacttcaaagagatgtacggatttacgattcagtactcgcatcttccttgtcttcaagta
ggaaatcagaagaaagcaaattatctgccaatggaagcttgcaagatagttgagggtcag
agatacacaaagaggttgaatgaaaagcagattacttccctgctgaaggttacttgccag
aggcccagagagcaggaattggatatcttgcagacagttcatcagaatgggtatgaacaa
gatccctatgcaaaggaatttggtatcaacatcagtgacagactcacctcagtggaagct
cgagttcttcctgctccatggctaaaatatcacgacactggcaaagagaaggaatgtttg
ccacagattggccaatggaatatgatgaacaagaaagtgataaatggaggcacagtaaac
cactgggcctgtattaacttttcacgaggtgttcaagaaagcactgctcgtggattttgt
caggagctagcacagatgtgccaaatatctggcatggaattcaaccatgagccagtaatt
ccgatctattctgcaaggccagagcaagtggagaaggctcttaaacatgtatataatgca
gcaatgaacaaactcaaggggaaagaactagagcttcttttagccatccttcctgacaat
aatggttctttatatggagatctgaagcgaatatgtgaaactgatttgggattaatatcc
cagtgctgcctgacaaagcatgtttttaaagttagcaagcaatacctggcaaatgtgtca
cttaaaattaatgtgaagatgggaggaagaaatactgtacttctagatgctataagttgg
agaattcccttggtcagtgatacaccaacgataatatttggagcagatgtaacacatcct
gaaactggagaggactccagtccatcaattgctgctgttgttgcttcccaagactggcct
gaagttacaaaatatgctggacttgtgtgtgctcaagctcatcggcaagaactcattcag
gacctgtacaagacatggcatgatcctcagcggggcacagttacaggaggcatgatcaga
gagcttctgatttccttcaggaaggccacaggacaaaagccgctaaggataatcttttat
agggatggtgtcagtgaagggcagttctatcaagtcttactatatgaattagatgctatt
cgtaaggcatgtgcgtccttagaaccaaattaccagccacctgttacctttgtggtggtc
caaaagcgccaccacacaagattatttgcaaacaatcacaaggacagaagtagcacagac
aggagtgggaacatcctacctggtacagtagttgattctaagatttgtcatcctaatgag
tttgacttctacctttgcagtcatgctggcatacaggggactagtaggccagcgcattac
catgttctatgggacgagaacaacttcacagctgatgaaatgcagacgctgacaaataat
ctatgctacacgtatgctcggtgcactcgatctgtttctgttgtaccaccagcatattat
gctcatctggctgcattccgagcccggttctacatggaaccagagatatctgagagctct
gcatcccggagcacacgcacagcaaatgggtcctctgtgaggcccctccctgccttgaaa
gagaaggtgaagagggtgatgttctactgttga |