Phoenix dactylifera (date palm): 103709571
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Entry
103709571 CDS
T03274
Name
(RefSeq) WD-40 repeat-containing protein MSI4-like isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
pda03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103709571
03083 Polycomb repressive complex
103709571
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103709571
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
103709571
Histone modification proteins
HAT complexes
HATB complex
103709571
HDAC complexes
Sin3A-HDAC complex
103709571
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
103709571
PRC2.2
103709571
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
103709571
Heterochromatin formation proteins
Other heterochromatin formation proteins
103709571
Chromatin remodeling factors
NuRD complex
103709571
NuRF complex
103709571
NuRF complex (fruit fly)
103709571
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
CAF1C_H4-bd
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
WDR55
DSE1_N
DNAI3_WD
Beta-prop_EML
EIF3I
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
eIF2A
Beta-prop_IFT140_1st
CFAP251_N
Beta-prop_NOL10_N
Beta-prop_SPT8
Beta-prop_LRRK2
Beta-prop_VPS8
Motif
Other DBs
NCBI-GeneID:
103709571
NCBI-ProteinID:
XP_008793220
UniProt:
A0A8B7C783
LinkDB
All DBs
Position
9:20639342..20658102
Genome browser
AA seq
471 aa
AA seq
DB search
MKEKKKDVAVEDRAGDESYNQWKAAIPLVYDWFTNHNLVWPSQSCRWGPQLEEGKYKNLH
RLYLSERTDGTFPNTLVISNCEVVKPRIAAAEHISKFNEEHCSPFIDEFKTIIHPGEVNR
IRELPQSSKIIATHTDSPDVLIWDVEAQPDRHVARNVSESLPDLILTGHQDNAEYALAMC
PLEPLVLSGGKDKSVVLWSIHDHVSVLAEASSDKSPGVSPESLSNKQSIEAGDEKNSESP
TIGPRGVFQGHEDTVEDVQFCPASPQEFCSAGDDSCIILWDARAGTSPVTKVEKAHDGDI
NCVDWNPHDVNLILTGSADGSVRMFDRRNLLTCDGAGSPVHRFELHKAAILCVQWSPDKA
SVFGSSSEDGFLNIWDYEKVGRNDGVARRVANAAYGLFFQHAGHRDKVVDFHWNASDPWT
IVSVSDDCARVNGGGTVQIWRMSDLIYRPEEEVLEELEKFKDDILSCSSET
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaaaaaaagaaggatgtcgcggttgaggaccgagcgggggacgagagctacaac
cagtggaaggctgcgatccctttggtctatgactggttcactaaccacaacctcgtgtgg
ccttcacagtcctgccggtggggcccacaactggaggaagggaaatacaagaatctccac
cgtctctacctttctgaacggactgatggcacctttccaaacactcttgtcatatcaaac
tgtgaagttgtaaaaccaaggattgcagcagcagagcacatatcaaagttcaatgaagag
cactgttcccccttcatagacgagtttaaaactattatacatccaggggaggttaacaga
ataagggaactccctcagagtagtaagataattgcgacgcatactgacagccctgatgta
cttatttgggatgttgaagcgcagcccgatcgccatgttgctcgcaatgtttcagaatct
cttccagatttgatattgacagggcatcaagataatgcggagtatgctcttgccatgtgc
ccattagagccacttgtactttctggagggaaggacaagtcagttgtcttgtggagcata
catgatcatgtatctgttctagcagaggcttcatctgataaatctcctggggtgtctcct
gagagtttgagtaataagcagtcaatagaagctggtgatgagaagaattcagaaagtcca
actattggaccacgaggtgtattccaggggcacgaagacactgttgaagatgtgcagttc
tgccctgctagtccacaggaattttgtagtgcaggtgatgattcttgcatcattctatgg
gatgctcgtgctggtaccagtcccgtcacaaaggttgaaaaagctcatgatggtgatatt
aactgtgttgattggaaccctcatgatgtgaatcttattttaactggatctgcagatggt
tctgttcgtatgtttgatcgccgaaacctcctaacttgtgatggtgctggatcacctgta
catagattcgaattgcataaggctgctattctctgtgttcagtggtctcctgacaaagcc
tcagtttttggaagctcttctgaggatggttttttaaacatctgggattatgaaaaggtt
ggtagaaatgacggtgttgcaaggagggtggctaatgccgcatatggtcttttctttcaa
catgcagggcacagagataaagttgttgatttccactggaatgcatctgacccatggaca
atagttagtgtttctgatgactgcgcacgtgtcaatggaggtgggacagtacagatatgg
cgtatgagtgatttgatttacaggcctgaagaagaggttctggaagagctggaaaagttt
aaggatgatatactttcatgttcatctgagacctga
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