Phoenix dactylifera (date palm): 103709595 Help Entry 103709595         CDS       T03274                                  Name (RefSeq) symplekin isoform X1   KO K06100   symplekin Organism pda  Phoenix dactylifera (date palm) Pathway pda03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pda00001]  09120 Genetic Information Processing   09122 Translation    03015 mRNA surveillance pathway     103709595  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:pda03021]     103709595    03019 Messenger RNA biogenesis [BR:pda03019]     103709595 Transcription machinery [BR:pda03021]  Eukaryotic type   RNA polymerase II system    Other transcription-related factors     Transcription termination factor      103709595 Messenger RNA biogenesis [BR:pda03019]  Eukaryotic type   mRNA processing factors    3' end processing     Cleavage stimulation factor (CSTF) complex      103709595     U7-dependent histone pre-mRNA processing factors      103709595 SSDB OrthologParalogGFIT Motif Pfam:  Symplekin_C SYMPK_PTA1_N INTS7_N HEAT_2 Adaptin_N CRM1_C Motif Other DBs NCBI-GeneID:  103709595 NCBI-ProteinID:  XP_017698891 UniProt:  A0A8B7MUJ0 LinkDB All DBs Position 3:3109511..3142832 Genome browser AA seq 1328 aa AA seqDB search MVGMMAADWAETAVSLLNSARSSGEIPAKLRWLRQLKEVLLHRDPSLLPDFAPRLAELQA DRASPVRKLLAEMIGDIGMKHMELLPEMIPSLIYFLKDSTPAVARQAIITGTYLFRNVLE KVVIQGLCSSDLDDSLKSSWAWMLKYKNAVLPIAVQPGSDGVRLLAVKFIEAIILLYTPD PDVSSDPPHEACEGMGFNISWLRGGHPLLNVGDLAMEASQSLRLLLDQLRFPQVKSLSNS IVIVLINSLSAIAEKRPSFYGRILPVLLGLDPASSVIKGVQVPNAHHALKNAFMACLKCT HSSAEPWRARLVEALKAINAGELAEPAVKLKENSGGIVVRREELSPPKDDKVTLQECDER NNDLGCKRNMDEECSDLSQDDVVSSKRARQTSVAAKEVTNESLQKSPDSVQINLPLISST TSRDGSSGPVQQLVSMFGALVAQGDKAAGSLEILVSSITCDLLAEVVIANMQHLPPTCPE ADGKEELISGLGYASGFVSNSLPALRPSVLASDILSLSSSLPMLASLLNIQPSASYDISK IQQGDEEKMTATTDATFSPSSVGDVIATTSASLPASVEPSELVTEKDGTAVPLYANMETT ESKIPGLDSTSSFDEIQESQDASHTSTAELQETNLGHAVNLVSTMRLDASTTDCEAQSPQ PAITDASQLPCIASVTTAPQYILPKMTVTNVDLTDEDKDHLQKVAFMRILEAYKQIAISG GSQIHFPLLSHLGVEYPLELDTWGLLQKHVLSDYMNHEGHELTLRVLYRLYREAEQDQDF FSSRTATSVYETFLLAVAETLHDTFPALDKSLSRLLGEVPYLPEGVLKLLERLCSPENER HEKDFQSGDRVTQGLSAVWNLILLRPSNRDRCLQIALQSAVHPVEEVRMKAIRLVANKLF PMPSISQKIEVFASEKLQSVADDIPATEDIDADGSALGLQKNGDLEKPPAGRQPPPSLDK NELTSDNPLDQNTTSSSISEAQRCISLYFALCTKKHSLLRRIFAIYKCIPKAAKQAVHRH IPILVRTIGTSPELLGIISDPPTGSESLLMLVLQTLTDGVVPSQDLISSVKKLYHSKFQD VDILIPVLSFLSKDEILPIFPQIVNLPLDKFQAGLTRMLQGSPHTGPCLSPPEILIAIHG IDPEKDKIPLKKVMDACSACFEQQNVFTQQVLAKVLNQLVEQIPLPLLFMRTVIQAIGVF PALVDFVMEILSRLINKQIWKYPKLWVGFLKCAIQTKPQSFSVLLQLPAPQLENALTRNP MLRAPLAEHANQPNIRSTLPRSTLVVLGLVQDSQASGPAQTSQSQAAETGSSAADVATEV TQESTAVS NT seq 3987 nt NT seq  +upstreamnt  +downstreamnt atggtggggatgatggcggcggattgggcggagaccgcggtgagtcttctcaactcggcg aggtcttccggagagattccggcgaagctgcggtggttgcggcagttgaaggaggttctc ttgcaccgggacccgtctctgctgcccgacttcgcgccccgactcgcggaactccaggcc gaccgcgccagccccgtgcggaagctccttgccgagatgattggtgatattggaatgaag catatggagcttttacctgaaatgattcctagtttaatttactttttaaaggattcaaca cctgcagttgctcgacaagctattattacaggaacttatttgtttcgaaatgtgttagaa aaggtggtaattcagggtttatgctcaagtgatttagacgattcattaaaatcgtcatgg gcatggatgctaaagtacaaaaatgcagtattgccaatagcagtccagcctgggagtgat ggtgttagattgcttgcggtaaagtttattgaagcaataattctactttatacaccggat cctgatgtttcctctgatccaccccatgaagcttgtgaagggatgggattcaatatatca tggttaagaggaggccatcctttgcttaatgttggagatctagctatggaagccagtcag agcttgcgattgttgctcgaccaacttaggttcccgcaagtgaaatcacttagtaactcc atagttattgtgctcataaatagtctctcagctatcgcggagaaaaggccttccttttat ggacgcatattaccagttttacttggtttggatccagcaagttctgtgatcaaaggagtg caagtcccaaatgcacaccatgcattgaagaatgcctttatggcatgtttgaaatgtaca cattcaagtgctgaaccgtggcgtgctcgtttggttgaagctctaaaagccattaatgct ggtgagttggcagaaccagcagtcaagcttaaggagaattctggaggtatagtagtccgt agagaagagttgtcacctcctaaggatgataaggtaacattgcaagagtgtgatgagcga aacaatgatcttgggtgtaaaagaaatatggatgaagagtgcagtgatttgtcacaagat gatgttgtttctagtaaaagagctagacaaacatctgttgcggctaaagaggttaccaat gaatcgcttcagaaaagtcctgattcagtccagattaatctgcctttgattagctctaca acttcgagggatggaagttctggacctgtacagcaacttgttagcatgtttggtgcatta gttgcccaaggtgataaagctgctgggtcactagagattcttgtttcaagtatcacttgt gacttgctagcggaagtagttattgctaatatgcagcatcttccaccaacttgtcctgaa gcagatgggaaggaagaattaatttctggtttgggttatgcctctggctttgttagtaat agcctgcctgctctgcggccatcagtgcttgcttcagatattctttcactgtcaagttct ctaccaatgctagcgtcactgttgaatattcaaccttcagcatcatatgatatttctaaa atccagcagggagatgaagagaaaatgacagccacaacagatgcaactttctcaccctct agtgttggtgatgtcattgcaactacatctgccagtttgcctgcttctgtggagccaagt gaacttgtaacagaaaaagacggtacagctgttccattatatgcaaacatggaaacaaca gagagtaaaatacctggtttggattccaccagttcttttgatgagattcaagagtcccag gatgcttctcatacttctactgccgagctgcaagaaacaaatctaggacatgctgttaat ttggtcagcacaatgcggcttgatgcttctacaactgattgtgaagcccagagtccacaa ccagccataacagatgcaagccagctgccttgtatagcatctgttactactgctcctcaa tatattctaccaaagatgacagtgactaatgtcgaccttactgatgaagacaaagatcat ctgcaaaaagtggcattcatgcgcatccttgaagcttacaagcaaatagcaatatctggt ggatcacaaatccactttcccctgctttctcacttgggagttgagtaccctttagaatta gatacatgggggcttctacaaaagcatgtgctgtctgactatatgaatcatgaggggcac gagttgacattacgtgtcctatacaggttgtatcgggaggcagagcaggatcaggacttt ttttcatctagaacggccacatcagtttatgaaacatttcttcttgctgtggcagaaaca cttcacgatactttcccagccttggataaatccttgagcagattgcttggtgaagtgcct tacctaccggagggtgtattgaagctgttagagcgcttatgctctcctgaaaatgagaga catgaaaaggactttcaaagtggtgaccgagttacgcaaggcctcagtgctgtttggaat ctgattttgcttaggccttctaatagagacagatgcctccagattgcattacagagtgca gtacatcctgtggaagaagtgcgaatgaaagcaatacgcctggtagcaaataagctattt cctatgccaagcatttctcaaaaaattgaagtatttgctagtgagaagctccagtcagta gcagatgatattcctgccacggaggacatcgatgccgatggttcagctcttggattgcaa aagaatggtgatttggaaaagccacctgctgggcggcagccgcccccaagtcttgataaa aatgagctcacatctgataacccattggaccaaaatacaacttcctcttcaatatcagag gcacaacggtgcatatcactttattttgctctttgcaccaagaagcattcccttcttcgg agaatttttgcaatttacaaatgcattccaaaagctgcaaaacaggcagtccatcgccat attcccatcctggttcgtactatagggacttcacccgaactgcttggcattatctcagat ccaccaactggaagcgagagcctcctcatgctggttttgcaaacactaacagatggagtt gttccttcacaagatttgatttcgtcagtcaaaaagttatatcattccaaatttcaggat gtagatattctaattccagtattatcatttctatcaaaagacgagatccttcctattttc ccccaaattgttaatcttcccctggataagtttcaagctggactcacccggatgctacag gggtcaccacatactggcccttgcctcagtccacctgaaattttgattgctatccatgga atagatcctgagaaagataagatacctctgaaaaaggtcatggatgcttgctctgcttgc tttgaacagcagaatgtgttcactcaacaagttttggcaaaggttttgaatcaattagtt gaacagatacctcttcctttgttgttcatgcgaactgtcatacaggcaataggtgtattc cctgccttggtggactttgtaatggagattctatcgcggcttataaacaagcagatatgg aagtatccaaagttatgggtgggtttcctgaagtgtgctatccagacaaaacctcagtca ttcagtgttctgctgcagttgcctgccccacagcttgaaaatgcattgaccagaaatccc atgctaagggctccactggccgagcatgctaaccagccgaacatacgttcaactctaccg aggtctacacttgtggttttggggcttgtgcaagattcacaagcttcaggcccagcacag acaagccagagtcaggctgcagaaacaggcagttctgctgcagatgttgctacggaagta actcaagaatctacggctgttagctga

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