Phoenix dactylifera (date palm): 103709597
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Entry
103709597 CDS
T03274
Name
(RefSeq) endoribonuclease Dicer homolog 3a-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103709597
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103709597
microRNA pathway
RISC loading complex
103709597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
DEAD
ResIII
PAZ
dsrm
SNF2-rel_dom
AAA_22
Motif
Other DBs
NCBI-GeneID:
103709597
NCBI-ProteinID:
XP_008793257
UniProt:
A0A8B7C7F2
LinkDB
All DBs
Position
9:complement(21002482..21023599)
Genome browser
AA seq
1510 aa
AA seq
DB search
MPLSTMAPPAAVNPSKRPPETADSEGSGAGAKKQKGECREFEPRSYQVAVYEVALRRNTI
AVLDTGAGKTMIAVMLIKEIGKELKMSGDRRIIIFLAPTVHLVTQQFEVIKIHTDFEVAH
YFGAKGVDEWTAACWEKEVATYQVMVMTPQILLDALRKAFLTLDIVRLLIFDECHHATGN
HPYARIMKEFYHKTVLRISVFGMTASPVARKGVSSVTDCEDQLSELESILDAKMYTVADR
SEMEFYVPAAKEVKRYYNPNIFLHEDLKSELELLWAKYDASVTQLQNSPLYQHRDATERI
KASRRQLSNWHEKICFCLDDHGLICANEATKICMEAVHHPYSAEGCDFPMENVVQYSAFL
EEVLHAVEKRMLDGYEMLLKTECGCLEAMHLGYISPKLYELMQIFKSFGASNHVLCLIFV
DRIITAKVVERLMKKISYLSHFTVSYLTGGSASVDALTPKMQKKTLHSFRSGKVNLLFTT
DVAEEGLHIPDCSCVIRFDLPKTVRSYVQSHGRARQAGSLYVIMLERGNIQQRNLLFDII
RSKHSMLDTALNRDPHALISKLSSDEEIDAYYVESTGARITADSSVSLVYKYCEKLPRDK
YFTPKPVFEFTLYGGSYQCTLTLPPNAAFQTLVGPVHRNSHMAKQLVCMDACKKLHQLGV
LNDHLLPFAEECLEIVCDENYEEKETAAGAGTTKRKELHGTTTVCALSGTWAHEKAGVTL
QGYKLNFTCDKVGQSYCDFVLLVDARLDEDIASTEIDLYLVDKIVKASVSPCGLIQLDME
QVEEAKLFQEIFFNGLFGRLFSGSRSSRKPREFLLKEDDISLWSTQNMYLLLPLEASCNQ
DHEVICINWKGISASASIVRFMRDIYMPVAANGPFGSFCSGSSETEWCESDMIQLANKTA
NLQSFKNMVVIAIHTGKIYSVLDVVIGSCAGSPFDGNSEKSPPEFRTYSEYFNKKYGIML
RHPGQPLLLLKHSHNPHNLLSSKSKHEGNVASKKSDKPQNHVHMPPELLIHIDVPIDVLK
SFYLLPSLMHRVESLMLASQLRKEIAFYPSNTCISNFLILEAISTVRCCEDFSMERLELL
GDSVLKYAVSCYLFMKFPKKHEGQLSSCRSQLICNAMLHRLGTKHNIQGYIRDAAFDPRR
WVAPGQLTLHPALCKCGVENSEVPKKIIHETEDKYVVIGKACDKGHRWICSKTISDCAEA
LIGAYYVGGGLGAALAVLKWLGIDAELEPELVEDVMRTASMYNYHPRIDEIETLESKLGY
RFSVRGLLLEAITHASQQELGACYCYQRLEFLGDSVLDLLITWHLFKCHKDIDPGELTDL
RSASVNNDNFAQVAIRHKLQQYLQHGSGLLLEQITEYVKRLENSPEDKYLVSSTSSSKGP
KVLGDIIESIAGAILIDTKLNLNKVWEIFEPLLSPIVTPDNLELPPLRELTELCSHYGYF
LNTKCETKGDTVVAMLEVQLKDVLVVRRGCERNKKAAKGQAAALLLKDLGERGFHIIAMP
PKGSNLEKIL
NT seq
4533 nt
NT seq
+upstream
nt +downstream
nt
atgcctctctcgacgatggctcctccggcggccgtgaatccgtcgaagagaccgccggag
acggccgatagcgaaggatcgggagccggagccaagaagcagaagggggaatgccgagaa
ttcgagccaagaagctatcaggtggcggtatatgaagtggcattgcggaggaacacgatc
gcggtgctggacacgggggcggggaagacgatgatcgctgtcatgctcatcaaagaaatc
gggaaggagcttaagatgagcggggaccgccggatcattatatttcttgcacctacagtt
catctcgtcacccagcaattcgaggtgataaagatccacactgattttgaagtggctcat
tactttggtgcgaagggtgttgatgagtggactgctgcatgctgggaaaaggaagtcgcc
acttatcaagttatggtcatgacaccccaaatattgttagatgctttaaggaaagctttc
ctgacattggatatagtacgtttattgatatttgatgagtgccatcatgccactggtaac
catccttacgctagaataatgaaggaattttatcataaaactgtgcttagaataagtgtt
tttggaatgactgcttcaccagttgcaagaaaaggggtgtcatcagttacggattgtgaa
gatcagctttctgaacttgaaagcattttggatgctaagatgtatactgttgcagacaga
agtgagatggaattttatgttcctgcagctaaagaagttaaaagatactataatccaaat
atattccttcatgaggatctgaaaagcgagttggaattattgtgggctaagtatgacgcc
tcagtcacccagctgcagaactcaccattatatcagcatagagatgccactgaaagaatt
aaagcatcaagacggcaactgtccaattggcatgaaaaaatctgcttttgtttagatgac
catggtctaatctgtgccaatgaggctactaaaatctgtatggaagctgttcatcatcca
tattctgcagaggggtgcgatttccccatggagaatgtagttcagtatagtgcttttctt
gaggaagtattgcatgcagttgaaaaacggatgctagatggttatgagatgctactgaag
actgaatgtggatgtttagaagcaatgcacttgggttatatctcgccaaaattgtatgaa
ttaatgcaaattttcaaatcttttggggcgtcaaatcatgtactctgcctcatttttgta
gatagaattattactgctaaagttgtagagcggttgatgaagaaaattagttatttgtca
catttcacagtttcgtatttgactggagggagtgcttcagtagatgcactgacccccaaa
atgcaaaagaagactctgcattcatttcgttctggaaaggtaaatttattgtttactact
gatgtggctgaagagggattacatataccggattgttcatgtgtgatacgctttgacttg
ccaaaaacagttcgtagttatgtccagtcccatggacgagctcgacaagctggttctctt
tatgtcatcatgcttgaacggggaaacatccaacagagaaatctattgtttgatatcatt
agaagcaaacactctatgctggacactgctttaaatagggaccctcatgcccttatctcc
aaactgtctagtgatgaggagatagatgcatattatgttgagtcaactggtgcaagaata
acagcagactccagtgtcagtcttgtctataaatattgtgaaaagctccctagagataag
tatttcactccaaagccagtttttgaattcactttgtatggtgggtcctatcagtgcaca
ttgactttacctcccaatgctgcatttcagacactggttggcccagttcatcgaaattct
cacatggcaaagcagttggtatgcatggatgcttgtaaaaaactgcatcaattgggagta
cttaatgatcatcttctcccatttgctgaagagtgtttggaaattgtatgcgatgaaaac
tatgaggaaaaagaaactgctgcaggagctggaacaacaaaaaggaaagagctacatggg
acaaccactgtctgtgctttgtccggaacctgggcacatgaaaaagctggtgtaactttg
cagggatataagttgaactttacatgtgataaagttggccagagttactgtgactttgtt
ctgcttgttgatgcaagactggatgaagatattgcttctacagaaatagatctttacttg
gttgataagattgtcaaagcctctgtttctccatgtgggcttattcagttggatatggaa
caggtggaagaagcaaaactgttccaagagattttcttcaatggattatttggcaggtta
ttttcaggatctaggtcatctaggaaaccaagggaattcttactaaaggaagacgacata
tcattatggagcactcagaacatgtatttgcttttaccattggaagcttcgtgtaatcaa
gatcatgaagttatatgtatcaattggaagggaatcagtgcaagtgcttcaattgtaagg
tttatgagagatatttatatgcctgtggctgcaaatggtccatttggcagtttttgctct
ggttcgtctgagactgaatggtgtgaatcagatatgattcaattggctaataagaccgca
aaccttcagagctttaaaaatatggtagtgattgcaatccatacaggaaagatatattct
gttcttgacgtggtaattggttcatgtgctggcagtccatttgatgggaatagtgaaaaa
tcaccaccagaatttcgtacatattcagaatattttaataagaagtatggtattatgctt
cgacatccaggacagccattattgttgctaaagcacagccacaatccacacaacctgcta
tcttcaaagtctaagcatgaaggtaatgtggcatcaaaaaaatcagacaagccacaaaat
catgttcacatgcctccagagcttttaattcacattgacgtaccaatagatgtcttaaaa
tcattctacttgctgccttccttgatgcaccgagtggaatccttgatgttagccagccaa
ctaaggaaggaaattgctttctatcccagcaatacctgtatatcaaatttcctgatattg
gaagcaatttcgacagtaagatgttgtgaggacttctccatggagcgtctagaactatta
ggagactctgtattaaagtatgcagtaagctgctatctctttatgaaatttcctaagaag
cacgaggggcaattatcttcctgcagatcccaattaatctgtaatgccatgcttcataga
cttggaactaaacacaatatacagggttacatacgtgatgctgcatttgatccccgtcgt
tgggttgcccctggacagcttactttacaccctgccctctgtaaatgcggagtggaaaat
tctgaagtgccgaagaaaattattcatgagactgaagataaatatgttgtgatcggcaag
gcttgtgataaaggacacagatggatctgttctaaaacaatatctgattgtgctgaggct
ctaataggagcatactatgtaggtggtggacttggtgctgcacttgcagtactgaaatgg
ctaggaattgatgctgaacttgagccggaattggttgaggatgtcatgaggactgcgtca
atgtataactatcatcccagaattgatgagattgaaacactggaatcaaaacttggctac
agatttagtgttagaggtcttttacttgaggctattacacatgcatctcagcaagaatta
ggagcttgctactgctaccagcggcttgaatttttgggtgactcagtattggaccttctc
attacatggcatctctttaaatgccataaagatattgatccaggggagttaaccgacctg
cgatcagcttcagtaaataatgataattttgctcaagtagcaatcaggcataagcttcag
cagtatctccaacatggttctggattgcttttagagcaaataacagaatatgttaaaaga
cttgagaattcccctgaggataagtatttggtttcatcaactagttcctcaaaagggcca
aaggttcttggagatattatagaaagtattgctggagcaatactaattgatacaaaactc
aatctaaataaagtatgggagatttttgaaccactgctttcgcctattgttacacctgat
aacctggagttgcctcccttacgagaactaactgagctttgcagccattatggctacttt
ttgaacacaaaatgtgaaactaagggagacacagtagttgcaatgctcgaggtgcagctc
aaggatgttttggttgtacgaaggggatgtgaaaggaataaaaaagctgccaaaggacaa
gcagctgccctgttactgaaggaccttggggaaagaggctttcacattatcgctatgcct
ccaaaaggaagcaacctggagaaaattctgtag
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