Phoenix dactylifera (date palm): 103709650
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Entry
103709650 CDS
T03274
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103709650
04121 Ubiquitin system [BR:
pda04121
]
103709650
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103709650
Membrane trafficking [BR:
pda04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
103709650
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103709650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_19
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-ANAPC11
zf-RING_UBOX
Zf_IFT144_1st
HypA
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103709650
NCBI-ProteinID:
XP_008793322
UniProt:
A0A8B7C7J0
LinkDB
All DBs
Position
13:7899259..7901628
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AA seq
339 aa
AA seq
DB search
MDEALVARYWCHMCSQMVNPVMEVEIKCPHCNNGFVEEMDGGGDLDAADLGSDRSLSLWA
PVLLGMMSRGSRRRRLQREEEEDDSGPHRYSESLRRRRRSLAILQLLQALRETNRSESDN
SEGERETERVRERERERVILINPFNQAIILQGSFDAGETQRQNSNSNSFGASFEDYFLGP
GLDLLLQHLAENDPNRYGSPPAQKEAIDAMPTVKIVEAMSCSVCLEDFEIGGEAREMPCK
HKFHCGCILPWLELHSSCPVCRFQMPADESKDSNGGGNSNRVEGGSGDGGDAGNGGNGRR
FWLPVPWPFNGLFSLSGSQSSGNSSSAPPSSSTPDSNSA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggctctggttgctagatactggtgccacatgtgctcacagatggtaaatcct
gtgatggaggtggagatcaaatgcccccattgtaataatggatttgtagaagaaatggat
ggtgggggagacttggatgccgccgatctgggctctgaccgatccctctctctttgggct
ccagtcttgcttggaatgatgagcaggggctcccgacgccgaaggcttcaaagggaagaa
gaagaggatgactctggtccgcatcgttactcagaatcccttcgtcgaaggaggaggagc
ttggccatcctacagctgctgcaagccctccgggaaacaaacagatcagagtctgataat
tctgagggtgagagggagacggaaagggttagagaaagggagagggagcgtgtgatccta
atcaatcctttcaaccaggctataattctccaaggatccttcgatgcaggcgaaactcag
agacagaattcgaacagcaacagctttggtgcttctttcgaagactactttcttgggcct
ggcctggatcttttgttgcagcatttggcagagaatgatcctaacagatatggatcaccg
cctgctcagaaagaggcaattgatgcaatgcccactgtaaaaattgtggaagccatgagc
tgctccgtctgtttggaagactttgaaataggtggagaggctagggagatgccttgtaaa
cataaattccattgcgggtgtatactaccatggctggagctccacagctcgtgcccagtt
tgtaggtttcagatgccagcagatgagtcgaaggattcaaatggaggtggtaacagcaat
agggtggagggtggtagtggggatggtggtgatgcgggtaatggagggaatgggaggaga
ttctggttgccagtgccttggcctttcaatgggctgttctccttatcagggtcccagagc
agtgggaattcttcttcggcaccgccgtcatcgtccacccccgatagtaactcagcctaa
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