Phoenix dactylifera (date palm): 103709781
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Entry
103709781 CDS
T03274
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103709781
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103709781
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Motif
Pfam:
Pec_lyase_N
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
103709781
NCBI-ProteinID:
XP_008793504
UniProt:
A0A8B7C7W8
LinkDB
All DBs
Position
8:21461235..21463759
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AA seq
446 aa
AA seq
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MTMEGLQTRPSFFLLSLFFLASATLSGANIAEFDDHWQKKAEEAFARSRAAYHPDPEAVT
NKFNKAVHLAVSQARNSTRRSLRSAGVNKFKGPCVATNPIDRCWRCRENWMENRKKLAGC
AKGFGRNAVGGKDGDFYVVTDPSDNDLVNPKYGTLRWGVIQDRPLWIIFARDMIIRLSEE
LMINSNKTIDGRGANVRIAYGAQITLQFVHNVIIHGIHIHDIKPSNGGIIRDSLQHFGIR
TKSDGDGISIYGSSDIWIDHCSLRNCADGLIDAIEGSTAITISNCHFTHHNDVLLFGASD
SNEHDSIMQITVAFNHFGKGLVQRMPRCRWGFVHVVNNDYTQWIMYAIGGSQHPTIISQG
NRFIAPLMQFAKEVTKRDYATEDVWKQWTWRSEGDLMQNGAFFRESGSPNTKSFHRKDFI
KAKPGTWVRRLTRFAGPLGCRAGRPC
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacaatggagggtcttcagacccgacccagcttcttcctcctctccctcttcttcctt
gcctccgccaccctgtccggcgccaacatcgcggagttcgacgaccattggcagaagaag
gcggaggaggccttcgccagatcccgtgccgcctaccatcccgaccccgaggccgtcacc
aacaagttcaataaggctgtccacttggcggtttcgcaagcccgcaacagcacgaggaga
tccctgaggtcggccggcgttaacaagttcaaggggccgtgcgtggccaccaacccgatc
gaccggtgctggcggtgccgggagaactggatggaaaaccgcaagaagctggccggctgt
gcgaagggcttcggtcgcaacgccgtgggcggcaaggacggcgacttctacgtggtgacc
gacccttccgacaacgatctggtgaaccccaagtacggcaccctccggtggggcgtcatc
caggaccggcccctctggatcatcttcgctcgcgacatgatcatccgcctctccgaggag
ctcatgatcaacagcaacaagaccatcgacggccgcggggccaacgtccgcatcgcctac
ggcgcccagataaccttgcagttcgtgcacaacgtcatcatccacggcatccacatccac
gacatcaaacccagcaacggcggcatcatcagggactccctccagcacttcggcatcagg
accaagagcgacggcgacggcatctccatctacggctccagcgacatctggatcgaccac
tgctccttgagaaactgcgccgacggcctcatcgatgccatcgagggatccaccgccatt
accatttccaactgccacttcacccaccacaacgatgtgctgctcttcggtgccagcgat
tcaaacgagcacgactcgataatgcagatcactgttgccttcaaccacttcgggaaaggc
cttgtgcagaggatgccaaggtgccgctgggggttcgtccacgtcgtcaacaatgactac
acccagtggataatgtatgccatcggtggtagccaacaccctaccatcatcagccaaggg
aaccgattcatcgctcctctcatgcaattcgccaaggaggtcaccaagagggactatgca
acagaggatgtctggaagcagtggacatggagatccgagggtgacttgatgcagaacgga
gccttcttccgtgagtcgggaagtccaaacacgaagtcgttccacaggaaggacttcatc
aaggcgaagccggggacatgggtgaggaggctcacacgcttcgccggtccgctcggctgc
agagccggccgcccgtgctga
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