Phoenix dactylifera (date palm): 103710186
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Entry
103710186 CDS
T03274
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103710186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103710186
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103710186
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
103710186
NCBI-ProteinID:
XP_008794049
UniProt:
A0A8B7C8L1
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Position
16:complement(514874..524112)
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AA seq
955 aa
AA seq
DB search
MEKDRSSRKSRDDRERDRDSSKDHHHHDRDRDHKHRRHHGEEKRHRSRDERHRSRDDSAR
DLEPRRDERHRDDDRRHRFREDSPSDMERRRERSTSGARDSVERDGVSREQSVERRHHSS
SSRKRKEHGGDEGQLDKNGKRVRVSDEGAEEKKARRRFEDRAAEDSSDLNGVYKEERKEE
RVSKNRRKEDGLRAMEEDREENMVKEEVMSDVEIKKQRKEVRRVSDSGKAGDKRDEDEAK
TVDRKEVREERRFKDRAKKEDLGTADEAKSSVLSVNSKHKSVNEHMINGDQSNMAMEESG
STTNVVAREPLTVASKVSISTAATHPLPTKVSSITTTNENEGVSIRSDEVPGKSSTDGTA
TSVSGKNGSLSLDALAKAKKALQMQKELAEKLKKIPMLNKAASTSTENTKVVSNKDGPKA
PPSGLGAQAGSSASLTSASAAPVQAMPRLPVGVTPSEKPSAAGGIDILPGLTTPNIEAVK
RAQELAAKMGFRQDPEFAPLINMFPGSSSTDVAAPQRPAKAPVLRLDAQGREIDEHGNVI
NMPKLTNLSTLKVNINKQKKEAFQIFKPDLDASAQSNSFFDERMGINKTKLLRPKRMTFQ
FVEEGKWSKQAEMIKFKSQFGEAQAKELKMKQSQLAKAKAEPDSNPNLIAVGVRVTKEKK
EEEIPEIEWWDKPILPSGSYDDVANVKLNMDRITIYIEHPLPIEPPVEPAPPPPQPLKLT
KKEQKKLRTQRRLAKERDRQEMIRQGLIEPPKPKIKMSNLMKVLGTEATQDPTKLEMEIR
SAAAEREQAHVDRNIARKLTPAERREKKERKLFDDPSTLETLVSVYKIKDLSHPQTRFKV
DVNAQENRLTGCAVISDSVCVVVVEGGRKPIKRYGKLMLKRINWSAAVANEDETEDSDAP
TNSCVLVWQGSIAKPSFNRFLVHRCRSEAAARKVFADAGVPHYWDLAINYTEELL
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggaccgatccagccggaaatcccgagacgaccgcgagagggatcgagattcc
agcaaggatcaccaccaccacgatcgcgaccgggatcacaagcaccggcgccaccacggc
gaggagaagcgccaccgctcccgggacgagcgccaccgctcccgggacgattccgcccgc
gatctcgagccgaggcgggacgagcggcaccgcgacgatgaccgccgccaccgcttccgg
gaggattccccctccgatatggagcggaggcgtgagcggtcgacgagtggggctagggat
tcggtcgagcgggatggggtttcccgcgagcagtctgtggagaggcgccaccattcgtct
tcctcgaggaagaggaaggagcacggaggagatgaggggcaattggacaagaatggcaag
cgggttagggtttctgatgagggggcagaggagaagaaggcaaggcggcgttttgaggac
cgagctgcagaggattcgagcgatctgaatggtgtctacaaagaagagaggaaagaagag
agggtttcgaagaatagaagaaaggaagatggattgagggcaatggaagaagatagggag
gagaatatggtgaaggaagaggtcatgagcgatgtggaaatcaagaaacagaggaaggaa
gtgaggagggttagcgatagtggcaaggcaggggacaagagagatgaagatgaagctaag
acagttgataggaaagaagtgagagaggaacgaagatttaaggatagggccaagaaagag
gatttggggactgcagatgaggcaaaatcatcagttttgtccgtcaattccaaacataaa
tcagtcaacgagcatatgattaatggtgatcagagcaacatggccatggaggagagtggt
tctacaactaatgttgttgctcgggaacccctcactgtggcatcaaaggtttctattagc
actgctgctactcatccccttcctaccaaggtatcttcaattactaccaccaatgaaaat
gagggagttagtattagatctgatgaggttcctggaaaatccagtacagatgggacagca
acttcagtctctggcaaaaatggcagcctgtctcttgatgctttagcgaaagctaaaaag
gctttacaaatgcagaaggaactagcggaaaagctgaagaagattcctatgctaaataaa
gctgctagtacgagcactgagaacaccaaggtagtatctaacaaggatggacctaaggct
cctccatcaggtttaggagcacaagctggctcttctgcatctttgacttctgcctctgca
gcccctgttcaggcaatgccaagattacctgttggggtaacgccgtctgaaaagccgtct
gctgcaggtggcattgacattcttcctggcctcacaacacctaatatcgaggctgtaaag
cgagcacaagagcttgctgctaagatgggatttcgccaggacccggagtttgcacctctc
ataaatatgtttcctggatcgtcatcaactgatgtggctgcacctcagagacctgccaag
gctcctgttctgcgcttagatgcccagggtagagaaattgatgaacatgggaatgtcatt
aatatgcccaagttgacaaatctcagtactctgaaggtcaatatcaacaaacagaagaaa
gaagcatttcaaattttcaaaccagatttagatgctagcgcacaatcaaattcttttttt
gatgagaggatgggtattaacaaaacaaagctcttgagacccaaaaggatgacatttcag
tttgtagaagaaggcaaatggtcaaaacaggcggagatgataaaatttaagagtcaattt
ggagaagcgcaagcaaaggaattgaagatgaagcagtcacagcttgcaaaggctaaggct
gagcctgacagtaacccaaatttgatagcagtaggggtgagagttactaaagagaagaag
gaggaagagatccctgaaatagagtggtgggacaagccgattttaccttcaggttcctat
gatgatgtcgccaatgtgaaactgaacatggacaggatcacgatatatatagagcacccg
cttccgattgagcccccagtagagcctgccccaccaccgccacagcctctgaagcttaca
aagaaggagcagaagaaattaaggacacagaggcgccttgcgaaggaaagagacaggcaa
gaaatgatcaggcagggcctgatagagcctcccaagcccaagatcaagatgagcaatcta
atgaaggtcctaggcactgaagcaactcaagaccccacaaagcttgaaatggaaattcgt
agtgctgctgctgagcgggagcaagctcatgtcgatagaaacattgctcgcaagctcact
cctgcagaacgtcgtgagaaaaaggagaggaagctctttgatgatccgagcacacttgag
actcttgtttctgtctacaagattaaagacctttcacacccacaaacacgcttcaaagtt
gatgtgaatgcccaagaaaaccgactgactggatgtgccgtgatatcggatagtgtctgt
gttgtggttgtggaagggggtagaaaaccaataaaaagatatgggaagctgatgctcaaa
cggataaactggtcagctgctgtcgccaatgaggatgaaactgaggactcagatgcccct
accaatagttgtgttttggtgtggcagggcagcatcgcaaaacctagcttcaatagattt
cttgttcaccggtgcagaagtgaggctgctgccaggaaagtgtttgcagatgctggggtt
ccgcactattgggatctggctatcaattacacggaggaactgttgtaa
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