Phoenix dactylifera (date palm): 103710229
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Entry
103710229 CDS
T03274
Name
(RefSeq) nuclear poly(A) polymerase 4-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103710229
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103710229
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
103710229
Messenger RNA biogenesis [BR:
pda03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
103710229
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Nrap_D2
Motif
Other DBs
NCBI-GeneID:
103710229
NCBI-ProteinID:
XP_008794101
UniProt:
A0A8B7C8Y1
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Position
9:complement(20027172..20038247)
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AA seq
794 aa
AA seq
DB search
MGSSDAMGRMPPPPLRQYGITKPISTAGPTEADLQRTKELEKFLVDAGLYESKEEAAKRE
EVLQEIDKIVKSWVKQLTHQRGYTDQMVEDANAVIFTFGSYRLGVHGPGADIDTLCVGPS
YVNQEEDFFIILHNILAEMDEVTELQPVPDAHVPVMKFKFHGISIDLLYASISLLVVPED
LDISHGSVLYNVDEATVRSLNGCRVADQILRLVPNVENFRTTLTCLKFWAKKRGVYSNVT
GFLGGVNWALLVARVCQLYPNAVPSMLVSRFFRVYTQWRWPNPVMLCPIEEHELGFPVWD
PRKNPRDRTHHMPIITPAYPCMNSSYNVSTSTLRVMMEQFQTGNKICEDIELNKAIWSAL
FEPYLFFETYKNYLQVDIIAADVEDLRLWKGRVESRLRQLTLKIERDTYGMLQCHPYPNE
YVDPSRQCSHCAFFMGLQRKQGVKIQEGQQFDIRGTVDEFRHSVNMYMFWKPGMEIYVSH
VRRKQIPSYVFPEGYKRPRPSRLISQHQVERLGGENGSEECEGGSAEGRLKRKKDADVND
FKSNEPEKRASPNRQKSPVAESVIGGSVEAPNVSRVVETEVVRQNTDGAYNRWPERKNDN
LIELDKQVNMDFVCPSRQVRTFSPDVNVNGIARPVSQDNQPEMTVDAEVNCLKKKGLAGV
NRSAEAGGAEIVHCGNDSSDVCRKLTNGTSHVEIVRASAIVCSSSESMCAEVGQEQLVAN
NDGNDSLESLQKGIVPLEKECLNGKGMMQNGMADELEANITLGVVLKARGGVNSDAAQKS
AIRHAFLIPKVLCL
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgggtagttctgatgccatgggcagaatgccgccaccgcctctaaggcagtatggcata
acaaaacctatctccactgctgggcccactgaggcggatctccagagaacaaaggaacta
gaaaaattcttggttgatgctggtctctatgagagcaaggaggaagctgcaaagagagag
gaggttttacaagagatagacaagattgttaaaagctgggttaagcaattaactcatcag
agggggtacactgatcaaatggtcgaggatgcaaatgctgtcatttttacgtttggatct
tatcgcttaggggttcatggacctggggctgacattgacactctgtgtgttggaccttcc
tatgttaaccaagaggaggattttttcattattttgcataacattttggcagaaatggat
gaagtgactgagctacaacctgtgccagatgctcatgttcctgttatgaaattcaaattc
catggaatatctatagatcttctttatgctagtatctccctcttagttgttcctgaagat
ttggacatctctcatggatctgtgctttacaatgttgatgaagcaactgttcgaagtctt
aacggctgcagggtggcagatcaaattcttcgacttgtccctaatgttgagaatttccgc
acaacgcttacatgcttaaaattttgggctaagaagcgtggtgtatactcgaatgtgact
ggatttcttgggggtgtcaattgggctttgttagttgctcgtgtctgccagctttatccc
aatgctgtgccgagtatgcttgtctcccgattcttcagagtctatacacaatggcgctgg
ccaaatcctgtgatgttatgtcccattgaggagcatgaacttgggttccctgtgtgggat
ccacgcaagaaccctcgtgatcgaactcatcatatgcctataattacacctgcatatcca
tgcatgaactctagctataatgtatcaactagcaccctccgagttatgatggaacaattc
cagacgggcaataaaatctgtgaggatatcgaattaaacaaggccatctggagtgctttg
ttcgagccttaccttttcttcgaaacgtacaaaaactatctgcaggttgacattattgct
gcagatgttgaggatctccgtttatggaagggaagggttgaatctcgattgaggcagttg
accctgaagattgagcgggacacatatgggatgttgcagtgtcatccataccccaatgag
tatgtagacccatccagacagtgttcgcattgtgccttctttatgggcttgcaaaggaaa
caaggggtgaaaatacaagaaggccaacaatttgacatacgtggaacagttgatgagttc
aggcattcagttaatatgtatatgttctggaagcctggaatggaaatatatgtatctcat
gttcggaggaagcagattccttcttatgtctttccagaaggttacaaacggcctcgtcca
tctaggcttataagccagcaccaggttgagagacttggtggtgaaaatggatctgaggaa
tgtgaaggtggatctgcagagggacgactgaagaggaaaaaagatgctgatgtaaatgat
tttaagtcgaatgaacctgagaaacgggcatccccaaataggcagaagtctcctgtagct
gaatctgtaattggtggatctgtggaagcacctaatgtcagtagggttgtggaaactgaa
gtggttagacagaatactgatggtgcatataaccgttggcctgagaggaaaaatgataac
ctaatagaactggataagcaggtaaacatggactttgtttgcccaagcaggcaggtgcgg
acattctcacctgatgtaaatgttaatggtattgccagacctgtttctcaggacaatcag
ccagagatgacagtggacgctgaggttaattgtttgaagaagaagggtttggctggtgtc
aacaggtctgcagaggcaggtggtgcagaaatagtgcactgtgggaatgacagcagtgat
gtttgtaggaagctgaccaatggaacttcacatgtggagattgttagggcttcagcaatt
gtttgcagcagttcagagagcatgtgtgcagaggtgggacaagagcaacttgtggccaac
aatgatgggaatgacagcctggaatcattgcagaaaggaattgtgcctttggagaaagag
tgcttgaatggaaagggaatgatgcaaaatggcatggcagatgagctcgaggcaaatatc
acacttggagtggttctcaaagctcgtgggggggtgaactctgatgctgcccagaaatct
gcaataaggcatgcgtttctaatccctaaagttttatgtttgtag
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