Phoenix dactylifera (date palm): 103710769
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Entry
103710769 CDS
T03274
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103710769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103710769
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
103710769
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
103710769
NCBI-ProteinID:
XP_026661911
UniProt:
A0A8B8J6J9
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All DBs
Position
2:7494677..7504815
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AA seq
1374 aa
AA seq
DB search
MDCVARRTRSRRALSEGAWLEGSPSLRGHGAAARSSGSSSAGGGREGAGVSDSPDGLGFD
ERSETSVGAPAPQVIVLDDDGDEDDGGRGVDGDCKKGASLQGNRGHRSSRKSAYADEAVE
LGAWPRPPGLRNGGESWSSSDRKAVIAVSDLKGDDSEATVEDRTRSKSGSNDVKSASWSG
SDAASGGLNACEHEGREGEMLEVNVAERKSEDKEACDGGGEKEIHKIADSNGEVEVLETN
DANVEEKDQELMVDEGETHEVHKHDVKFGVQESEQTGKQGVSLNLADANRERKDQEFEIA
DGKTHEVCEPNVEFRAQESQQTGKEGGSHNLAFANGERKDQDVEVDEGKTHEVHEPNVEF
EVEECRESGRKDGSNILADAEGQVDVLEINDVDEEEDAEVGSDKRSAQEVRYFVTTSCVA
RRTRSRMGKQRRVSYTQYFKVELSDDSEDEEDEEEEEAEDDSCYESDYADPENTRIMSGG
GQKGCGEDGQNYKVKPDVRSFSGEDGSIAVAHHAQSCFDSEPCNKKQKVGFASNLDESKE
NFGFSSGMDCGKGSCRRNQVKSGGGGSKIDVDGREWGSRREGPQLGKTKKRKRLRALKSC
SLFNLLVDTICNDLDKLPENLVSSKEKSSLSNVKPSCNKDIFPCIFSFADEDGKPVEKSD
FENALDELWADFEFALESNNIGTYNNDEGQIEVDIPEDESDLLTLCSKGKHQFILDEQIG
TRCKFCSFVNLEIKYIIPSLATHIWEGSARINSAKVEGTLLFDDLCRTVKDDGNPNSCGL
LKGTVWDLVPGIKDKMYEHQQEAFEFMWKNLAGGIDLDELKSGARSDVIGGCVISHAPGT
GKTRLSIIFIQTYMKVFPECRPVIVAPSGMLLTWEEEFRKWNVDLPIHNLNAPDYSGKED
IAFRQLAAKEPRNISFMRLVKLYSWVKSNGILGISYGLFKKLTADNSCDPKLSQVLLEKP
GLLVLDEGHTPRNERSLIWKALGKIKTEKRIILSGTPFQNNFGELYNIMCLVKPKFAEKI
SIRTSKRGQRKAKFISYMEQDILPEKNEGKEIWASLTNHVTDDNAEEIRSILKPFVHIHS
GNILNTLPGLRECVIELDPPPHQKDIIEKMEHIGSNVIFENEYKTSLASIHPSLVTYLNL
STEEESLLDKPLLEKQKLNPYIGVKTRFVMEVVRLCEALKEKVLIFSQYIQPLSMIKDQL
IKLFNWSEGKEVLQMDGKIRTKYRQSSIDIFNDMESEARVLLASTKACCEGISLTGASRV
VLLDVVWNPAVGRQAISRAYRIGQKKFVYTYNLMTSGTGERDKYDRQAKKDHLSKLVFST
EIDFTNVRNSSSQAKEEHSTKLISEDKILEEMTAHDKLKGMFLKIYYPPKGICT
NT seq
4125 nt
NT seq
+upstream
nt +downstream
nt
atggattgcgtcgcgaggagaacgcgcagccggagagccctaagcgaaggggcctggctc
gaagggtcgcccagccttcgcggacacggcgccgccgcccgctccagcggctcctcctcg
gccggcggaggccgggagggggctggggtttcggattccccggatggattaggattcgat
gagaggagcgagacttcggttggggcaccggccccgcaagtgatcgtcctcgacgacgac
ggtgacgaggacgacggaggaagaggagttgacggggattgcaagaaaggggcttctttg
caggggaatcgcggccaccggagctctcggaagtctgcttacgcggatgaggcggtggaa
ttgggagcttggccgcgaccaccggggttgcggaacggaggggagtcctggtcgtcctcc
gatcggaaagcggtcatcgccgtttcggatctcaagggtgacgatagcgaggccaccgtg
gaagaccgaacgaggtcgaaatcaggttctaatgatgtaaaatcggcttcttggagcggt
tcagacgctgccagtgggggattgaatgcttgcgaacatgaaggaagagaaggggaaatg
cttgaagtcaatgttgccgaaagaaagtcagaagataaagaagcctgtgacggcggtgga
gaaaaggaaattcataaaatcgcggattctaatggggaagtcgaagttctagaaactaat
gatgctaatgtagaagaaaaagatcaggaattgatggttgatgaaggggaaacccatgaa
gttcacaaacacgatgtcaaatttggagttcaagaatctgaacaaactggaaaacaaggg
gtaagtctcaatcttgccgacgccaatagagaaagaaaagatcaggaatttgagattgct
gacgggaaaacccatgaagtttgtgaacccaatgtcgaattcagagctcaagaatctcaa
caaactggcaaagaaggggggagccataatcttgcttttgccaatggagaaagaaaagat
caggatgttgaggttgatgaagggaaaacccatgaagttcacgaacccaatgtcgaattc
gaagttgaagaatgtcgagaaagtggcagaaaagatggaagtaacattcttgctgacgct
gaagggcaggtggatgttctggaaattaatgatgttgatgaagaagaggatgctgaggta
ggcagtgacaaaaggagtgctcaggaagttaggtattttgtgacaacttcttgtgtagca
aggaggactcgatcgcgaatggggaagcaaaggagagtgtcatatacgcaatacttcaag
gtggaattgtcggatgattcagaggatgaggaggatgaagaagaggaggaggcggaagat
gattcctgttatgaaagtgactatgctgatcctgagaacaccaggataatgagcggaggt
ggccagaaggggtgtggggaggatgggcagaactacaaggttaagccggatgtaagaagt
ttctctggcgaggacgggagtatagcagttgcccaccatgctcaatcctgttttgattca
gagccttgcaacaagaaacagaaggttgggtttgcaagtaacctggatgaatcaaaggaa
aattttggtttttcatctggtatggattgtgggaagggcagttgcagaaggaatcaggtt
aagagtggtggtggtggcagcaagatagatgtggatgggagagaatgggggtcaaggcga
gagggaccacagctggggaaaaccaagaagagaaagcgtttgcgggcattgaagagttgc
tccctctttaatcttcttgttgataccatttgcaatgacctagataagcttccagagaat
ttggtttcttccaaggaaaaatcttctctatcaaatgtgaaaccatcttgcaacaaggat
atatttccatgcatattctcgtttgcagatgaagatggcaaacctgttgaaaaatcagat
tttgagaatgcgctggatgaattatgggctgattttgaatttgctctagagtcgaacaat
atcggtacctacaataatgatgagggtcaaatagaagttgatatacctgaggatgaatct
gatctattgacattatgttctaaagggaaacaccagtttattcttgatgagcagatagga
actagatgcaagttctgctcctttgtgaatctggagatcaaatatataataccatctttg
gcaacacacatttgggaagggtcagctaggataaactctgctaaggtggaaggcacgctc
ttatttgatgatctttgtagaacagttaaagatgatggtaatccaaattcatgcggtctt
ctaaagggaactgtatgggatctcgttccagggattaaggataaaatgtatgaacatcag
caggaagcatttgagtttatgtggaaaaatctagctggaggaattgaccttgatgagctg
aaatcaggtgctagatctgacgtcattggtgggtgtgtgatttcacatgccccagggaca
ggaaagacgcgattatcaataatctttatccagacatacatgaaggttttcccagaatgc
aggcctgtaattgttgctcctagtggaatgctcctgacgtgggaagaagaattcagaaaa
tggaacgtggaccttccaattcataatttgaatgctccagactactctgggaaggaagat
attgccttccgtcagttggcagcgaaagaacctcgaaatatcagtttcatgcgtctagtg
aaattatattcatgggtcaaaagtaacggtatccttggaataagctatggcttgttcaaa
aagctaacagcagacaactcttgtgacccgaaattgagtcaggtcctgcttgagaagcca
ggtttgcttgttcttgatgaggggcacacacccagaaatgaacgcagtcttatttggaag
gcactgggaaaaatcaaaacagaaaaacgtatcatcctttctggaactccttttcaaaat
aattttggggagctttacaatattatgtgtctggtaaaacctaaatttgctgaaaagatc
tcaattagaacatcaaaacgaggtcaaagaaaggcaaaattcatctcgtacatggaacaa
gacatcttaccagaaaagaatgaaggaaaagagatttgggcttctctaactaatcatgtt
actgatgataatgcggaagaaataagatcaatattaaaaccatttgtgcatattcatagt
ggcaatatcctcaacactcttcctggtttgagggaatgcgtgattgaattagatccacca
cctcaccaaaaagacatcattgagaaaatggaacacattggatcgaatgtcatctttgag
aatgaatataagacctccttggcttctattcatccttcattagtcacttatttgaacttg
tctactgaggaagaatctcttttagacaaacctttgctagagaaacagaagttgaacccc
tatataggggtgaaaacaagatttgtaatggaagttgttcgactttgcgaagcattaaaa
gagaaggttttgattttcagtcagtatattcagccattgtctatgataaaggaccaacta
atcaagttattcaattggagtgaagggaaggaggtgttgcagatggatggcaagatccgc
acaaaatatcgtcaatcctcaattgatattttcaacgatatggaaagtgaagcaagggtg
ctgcttgcatcaacaaaggcttgctgtgaagggataagcctaactggggcttcaagggtt
gtacttctggatgttgtgtggaacccagcagtaggaagacaagccatcagccgagcatac
agaattgggcagaagaaatttgtgtacacttacaacctgatgacaagtggaacaggggaa
agagacaaatatgacagacaagctaaaaaggatcatctttctaaattagtgttttccact
gaaattgattttactaatgtcagaaacagttcatcacaggccaaagaggaacattcaact
aaattgatttctgaagataaaattttagaagagatgactgcacatgacaaactaaagggc
atgtttctcaagatttactatccaccaaagggtatatgcacttaa
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