Phoenix dactylifera (date palm): 103711055
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Entry
103711055 CDS
T03274
Name
(RefSeq) DNA mismatch repair protein MLH1 isoform X1
KO
K08734
DNA mismatch repair protein MLH1
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03430
Mismatch repair
pda03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103711055
03460 Fanconi anemia pathway
103711055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103711055
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
103711055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
103711055
NCBI-ProteinID:
XP_008795249
UniProt:
A0A8B7CAU3
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Position
10:complement(3556952..3572123)
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AA seq
741 aa
AA seq
DB search
MEIDEPEQATDSTEARVEPPRIRRLDESVVNRIAAGEVIQRPASAVKELVENSLDAGATS
ISVVVKDGGLKLIQVSDNGHGIRYEDLPILCERHTTSKLSTYEDLQTIKSMGFRGEALAS
MTYVGHVTVTTITEGQLHGYRVSYRDGVMEHEPRPCAAVRGTQIMVENLFYNMIARRKTL
QSSSDDYPKIIDLISRFAVHNISVSFSCRKHGANRADVHTVASCSRLDAIRTVYGVSVAR
DLMEITTSDDNPARSIFKMDGFISNANYVAKKTTMILFINDRLVECTALKRAIEVVYSAT
LPKASKPFIYMLISLPSEHVDVNMHPTKREVSLLNQESLIETIQTAVESKLMNSNTSRTF
QTQAVNSSVYTSQTSHISGKKDPENSAFSSGTSRTKSQKVPVHKMVRTDARDPFGRLHAY
WQDGPASQHEKKSDLASVRNAVRLRRNPKESADLTSIHELLGDIDSNVHSGLLDIVKNCT
YVGLADEVFALLQHNTHLYLMNVVSVSKELMYQQAIRRFSHFNAIQLSEPAPLQELLMMA
LKEEDLESVDDDNDDLKQKIAEVNIELLKQKAEMLDELFCIHIDQEGNLTRLPVILDQHT
PDMDYVPEFLLSLGNDVDWENEKECFQTISAVLGNFYAIHPPVLPNPFGSGIQFYKKRRE
ASPTKDLGNESANPEDVGEDDVDHELLAEAETAWAQREWTIQHVLFPSMRLFLKPSKSMA
TNGTFVQVASLEKLYRIFERC
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatgaacccgagcaggcgacggactccaccgaggcgagggtggagccgccg
aggattcggcggctggacgagtcggtggtgaaccggattgcggcgggggaggtgatccag
cggccggcctctgctgtgaaggagctagtggagaacagccttgacgccggggccacctcc
atctccgtcgtcgtcaaggacggcggcctcaagctcatccaggtctcggacaacggccac
ggcatccggtatgaggatctgccaatactatgtgaaagacacaccacgtcaaagttatct
acatatgaggacctacagacaattaaatcaatgggttttagaggggaggctttggccagc
atgacgtatgttggtcatgtcactgtgacaactataactgaaggtcaactgcatggttac
agggtttcttatagagatggagtaatggagcatgaacccaggccctgtgccgctgttaga
ggaactcaaataatggttgagaatctattttacaatatgattgctcggagaaagacattg
cagagctccagtgatgattacccaaagattatagacttgattagtcggtttgcagtccat
aacattagtgtgagcttttcttgcaggaagcacggcgcaaatagagcagatgttcacacg
gttgcttcatgttcaaggctggatgctatcagaactgtgtatggtgtttctgtggctcgt
gatctgatggaaataactacttcagatgacaatcctgcccgatcaatcttcaagatggat
ggttttatttcaaatgcaaattatgtagcgaaaaaaacaacaatgatacttttcattaat
gacaggctggtggaatgcactgccttgaaaagagctattgaagttgtttattctgcaact
ttgccgaaagcatcaaaacctttcatttatatgttaatcagtctcccatccgagcatgta
gatgtcaatatgcatccgacaaaaagagaggtaagccttttaaaccaggagagtcttatt
gagaccatacagactgctgtcgagtctaagttgatgaactctaacacatcaagaacattt
caaactcaggctgtaaattcctcagtctatacatcccagacgagtcatattagtggaaaa
aaggaccctgaaaacagtgccttcagttctggtacatccaggacaaaatctcaaaaggta
ccagtacacaaaatggttagaactgatgcacgcgatccttttggaaggttgcatgcatat
tggcaagatgggcctgcttcgcagcatgaaaagaaatctgacttagcttctgtgagaaat
gctgtaagactaagaaggaaccctaaagagtctgcagatttgactagcatccatgagctc
cttggtgacattgattctaatgttcattctggtctcttggatattgttaagaattgcaca
tatgttggacttgctgatgaagtttttgcattgctacagcacaatactcatctgtaccta
atgaatgtagtatctgtgagcaaggaattaatgtatcaacaagccattcgtcgtttttcc
catttcaatgccatccaacttagtgaaccagctcctctacaggaattgttaatgatggca
ctgaaagaagaagacttggaatccgtggatgatgataatgatgatctaaaacagaagata
gcagaagtaaatattgagttgctcaagcaaaaggcggagatgctagatgagcttttctgt
atacacatagatcaagaagggaatctgacaaggctccctgttatacttgaccagcatact
cctgacatggactatgttccagaatttttgttgagtttgggtaatgatgttgattgggag
aacgagaaagaatgcttccagacaatatcagctgttcttggaaacttctatgccatacat
cctcctgttctgccaaatccatttggcagtgggattcaattctacaagaaaagaagggaa
gctagtcctaccaaagatctagggaatgagtcagccaatccagaggatgttggagaagat
gatgtagatcatgaactacttgctgaggcagaaacggcatgggcacagcgtgaatggacc
attcagcacgtcttattcccatccatgaggcttttcctcaagccatcaaaatcaatggca
acaaatggaacttttgttcaggttgcttctcttgagaagctttacagaatatttgaaagg
tgttaa
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