KEGG   Phoenix dactylifera (date palm): 103711187
Entry
103711187         CDS       T03274                                 
Name
(RefSeq) protein ELC-like
  KO
K12183  ESCRT-I complex subunit TSG101
Organism
pda  Phoenix dactylifera (date palm)
Pathway
pda03250  Viral life cycle - HIV-1
pda03272  Virion - Hepatitis viruses
pda04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pda00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    103711187
   03272 Virion - Hepatitis viruses
    103711187
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    103711187
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pda04131]
    103711187
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pda04147]
    103711187
Membrane trafficking [BR:pda04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-I complex
    103711187
Exosome [BR:pda04147]
 Exosomal proteins
  Proteins found in most exosomes
   103711187
SSDB
Motif
Pfam: UEV Vps23_core UQ_con ATG16
Other DBs
NCBI-GeneID: 103711187
NCBI-ProteinID: XP_008795463
UniProt: A0A8B7CB08
LinkDB
Position
11:12774820..12786470
AA seq 422 aa
MAPPPPPVVPASPGAQYAQQFLSTVLSQRGPAALPYTEDAKWLIRQHLVALAESYPSLHP
KASAFTHNDGRTVNLLEAEGTIPIVYQGAVYNIPAVIWLLEPYPRSPPAVFVAPTRDMVV
KPGHPHVDSSGSVLIPYLRSWVFPSSNLVDLVRSLSHLFGLDPPLYTRQNPNNSTTPNPT
PNPSSSHHPSPSPSPSPSPSPTPSSSSSSFPSRIYSSLSPYGGRFPPSPQAAATRRTEDA
AEVYRRNAISKVVDMVHDEMAGLRRAREAEMEGLFSTQAELRRREEELSRGLRDMLEEKE
GLEQQLQLILMNTDVLEGWVRENEGRRRRAGDVNVDDAFEPADVLSRQMLECTAADLAVE
DTIYSLDKAVQEGSIPFDMYLKSVRALSRDQFFHRAMLAKVRAAQVQAQVTSMAARLPQY
AS
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggcccctccgccgccgcctgtagtcccggcctcgccgggcgcccagtacgcccagcag
ttcctgagcaccgtcctctctcagcgcgggccggcggcgctgccgtacacggaggacgcg
aagtggctgatccggcagcacctggtggcgctggccgagtcctacccctctctccacccg
aaggcctccgccttcacccacaacgacggccgcacggtgaacctcctcgaggcggagggc
accatccccatagtgtaccagggcgccgtctacaacatccccgccgtgatctggctcctc
gaaccctacccccgctccccgcccgccgtattcgtcgccccgacccgcgacatggtcgtc
aagcccggccacccccacgtcgacagctccggctccgtcctcatcccctacctccgctcc
tgggtcttcccctcctccaacctcgtcgacctcgtccgctccctctcccacctcttcggc
ctcgatccccccctctacacccgccaaaaccccaataattccactacccctaaccctacc
cctaatccctcctcttcccatcacccctccccatccccatccccatccccatccccttcc
cccactccatcctcgtcatcttcgtcgtttccatcacggatctactcatctttgtcgccc
tatggcgggcgattcccgccctcgccgcaggcggcggcgacgagacggaccgaggacgcg
gccgaggtctaccgccgcaacgcgatcagcaaggttgtcgatatggtgcatgacgaaatg
gcgggtttacggagagcgcgggaggcggagatggaggggctgttcagtacccaggcggag
ttgaggcggcgggaggaggagctttctagggggttgagggacatgttggaggagaaggag
ggattggagcagcagctgcagctgattctgatgaatacggacgtgttggagggttgggtg
agggagaatgagggaaggaggcggagggctggggatgtcaatgtggatgatgcgtttgag
cctgcggatgtgctgtcgaggcagatgctggagtgcacggcggcggatttggcagtggaa
gacacgatttactcgctggacaaggcagtgcaggaggggtcgatcccattcgatatgtat
ctgaagagcgtgagggcattgtcgagggaccagttcttccatcgagcgatgttggccaag
gtgcgggctgcacaggtgcaggctcaggtcacgagtatggcagccaggttgccacagtat
gcttcgtag

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