Phoenix dactylifera (date palm): 103711194
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Entry
103711194 CDS
T03274
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH14 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pda03400
]
103711194
Enzymes [BR:
pda01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103711194
DNA repair and recombination proteins [BR:
pda03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
103711194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
DExH14_plug
ResIII
Helicase_C
AAA_19
T2SSE
DEXQc_Suv3
PhoH
SWI2_SNF2
UvrD-helicase
DUF4600
Motif
Other DBs
NCBI-GeneID:
103711194
NCBI-ProteinID:
XP_017699139
UniProt:
A0A8B7MVF3
LinkDB
All DBs
Position
6:complement(15029876..15081205)
Genome browser
AA seq
2088 aa
AA seq
DB search
MLVSLPRLTNSLRGHYDVDQAYLQRKTILQNLKSRRSRDDSELARKLVPGWDEASSDVRQ
AYKQFLGAIVELINDEVASEEFQEVARAVYDLFRGPDVDYDVTKGIAEKREELHRLVGYY
VPDSSIQKVASSAQRLFTLQCTTGHEVALIQERVVDGAADSSSEFGANILFQSPSRFVVD
VPLEHGISLANDCGTTAPFPVEHYDSIVSGHHHSSPDPGTVSLRWLKDACDLIVKRGGSQ
LSGDELAMALCRVLLSNKAGDEIAGDLLDLVGDGAFETVQDLLLHRKELVEVIQHALLIL
KSEKLSSSSQLKMPSYGTQVTIQTESERQIDKLRRKEEKRHKRGADYGSMHDFPAESFSA
LLSASEKKQPFDDLIGTGRGPNSFSVGALPQGTMRIHHKGYEEVRIPPTPTAAMKPDEKL
IEITELDEFAQVAFRGYKSLNRIQSRIFQATYHTNENILVCAPTGAGKTNIAMVAILHEI
KQHFRDGILHKNEFKIVYVAPMKALAAEVTSTFSRRLSPLNLAVKELTGDMQLSRNELEE
TQMIVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLNDDRGSVIEALVARTLRQVEST
QSMIRIVGLSATLPNYIEVAQFLRVNPESGLFFFDSSYRPVPLAQQYIGISERDYTKKME
LFNSICYEKVADSLKQGYQAMVFVHSRKDTGKTARTLIDIAQKAGELDFFMNDKHPQFSL
IKREVSKSKSREVIGLFEFGFGIHHAGMLRADRGLTERLFSDGLLKVLVCTATLAWGVNL
PAHTVIIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRPQFDKSGEGIIMTTHDKLAYYLR
LLTSQLPIESQFINSLKDNLNAEVALGTVTNVKEACAWLGYTYLFIRMKTNPLVYGVTWD
EVIGDPSLTTKQRSLITDAARALDKAKMMRFDEKSGNFYCTELGRIASHFYLQYSSVETY
NLMLRRHMNDSEVINMVAHSSEFENIAVREEEQDELEKLSKFACPLEVKGGTTDKHGKIS
ILIQVRISRGSIESFSLISDAAYICASLGRIMRALFEICLRRGWCEMTCFMLEYCKAVDR
QIWPHQHPLRQFDRDLSLEILRKLEERGADLDRLFEMEEKDIGALIRYAPGGKLVKQYLG
YFPNIILSATISPITRTVLKVDLLITPDFVWKERFHGTAQCWLILVEDSENDHIYHSDFF
TLTKRMARGDSQKISFTVPIFEPHPPQYFIRAVSDSWLHAESLYTVSFHNLTLPETQISH
TELLDLKPLPVSALGNEAYENLYKFSHFNPIQTEAFHVLYHSNDNVLLGAPTGSGKTISA
ELAMLHLFNTEPDMKVVYIAPLKAIVRERMNDWRKRLVSQLGKKMVEMTGDFTPDLMALF
SADIIISTPEKWDGISRSWHSRSYVMKVGLMILDEIHLLGADRGPILEVIVSRMRYISSQ
TERSIRFVGLSTALANARDLADWLGIGENGLFNFKPSVRPVPLEVHIQGYPGKFYCPRMN
SMNKPAYAAICTHSPAKPVLIFVSSRRQTRLTALDLIQLAASDENPRQFLNMSEATLEMV
LSQVTDNNLRHTLQFGIGLHHAGLKDRDRSLVEELFSNNKIQILVSTSTLAWGVNLPAFL
VIIKGTEYYDGKAKRYVDFPITDILQMMGRAGRPQYDQHGKAVILVHEPKKSFYKKFLYE
PFPVESNLREHLHDHINAEIVSGTICHKEDAVHYLTWTYLFRRLVVNPAYYGLEDTEASA
LNSYLSRLVQSTFEDLEDSGCIKFNENFVEPLMLGSVASQYYLSYMTVSMFGSNIGPNTS
LEVFLHILSAVAEFDELPVRHNEENINRTLSEKVPYLVDQHHLDDPHVKANLLFQAHFSR
IELPISDYVTDLKSVLDQSIRIIQAMIDISANSGWLSSTMTCMHLLQMVMQGLWFERDSS
LWMLPCMNNDLFSHIKKAGISTLQDLLYLPDANLQRLLRQFPSPELYQDLQQFPRVQAKL
KLQEEDGQKSPILNIRLEKINSKCSTSRAFAPRFPKVKDEAWWLVLGNVTTSELYALKRV
SFSDRLFTRMELPPTVINLQETKLILASDCYLGLEQEHSIGESKNQFS
NT seq
6267 nt
NT seq
+upstream
nt +downstream
nt
atgctggtctcgttgcctcgcctgacgaattctctcagaggtcactacgacgtcgatcag
gcttacctccagcgcaaaactatcctccagaatctcaaatcaagaagatcgcgtgatgat
tctgaacttgcgcggaagttggttcctggatgggatgaagcttcaagtgatgtgcgccaa
gcatataaacaatttcttggtgctatagtggagttgataaatgatgaggtggcctcagaa
gaatttcaggaagtggcaagagctgtttatgatctgtttagggggccggatgtggactat
gatgttactaaggggattgccgagaaaagggaagagttgcataggcttgttggttactat
gttccagactcaagtattcagaaagtagcttcgtcagctcagagactttttactttgcag
tgcactactggccatgaggttgcactcatccaggaaagggtggtggatggggctgcagat
agttccagtgaatttggtgctaatattctttttcaatctccttctcgctttgtggtggac
gtgccattggaacatggtatatccttggccaatgattgtggtactactgctccattccct
gtggagcattatgatagcatagtatctggccatcatcattcaagtcctgatccggggaca
gtgagtttgagatggctgaaagatgcatgtgatcttatagtgaagaggggtggctcccag
ctttctggagatgaacttgcaatggcactttgtcgggtgctcctgtcaaacaaagcaggc
gatgagatagctggtgatttgttggatcttgttggtgatggcgcatttgaaactgtacaa
gatttattgttgcatcggaaggagcttgtggaggtgatccaacatgcgttgctcatactt
aaatctgagaaattgtcttcaagcagtcaactgaagatgccgagctatggcacacaggtt
accatacaaacagaatctgaacggcaaattgataaacttagacgcaaagaggaaaagcgt
cataaacgtggggcagattatgggagcatgcatgattttcctgctgaaagtttttctgct
ctactttcagccagcgagaaaaaacaaccttttgatgatctgattgggacaggccggggc
ccaaattctttctcagttggtgctcttcctcagggaacaatgaggatacatcataaaggc
tatgaagaagtcagaattccacccactccaactgctgcaatgaagcctgatgaaaagctg
attgagatcacagaactggatgagtttgctcaagttgctttccggggatataaatcactc
aaccgcattcagagccgtatttttcaagcaacatatcatacaaatgaaaatatactagtt
tgtgcaccgactggtgctggcaagacaaatattgctatggttgctattcttcatgagatc
aagcaacatttcagggatggaattttgcataaaaatgagtttaaaatagtatatgttgct
cccatgaaggctttggcagctgaggtgacatccacattcagtcgccgcttatctcccttg
aatctggcagtaaaagaacttactggtgacatgcaactctctaggaatgagctcgaggaa
acccagatgatagttacaacacctgaaaaatgggatgtcattactcgcaaaagcagtgac
atgtcaatgtcaatgctggtgaaactcctaattattgatgaagtacacttgttgaatgat
gatagaggctctgtgatagaagcgctagttgctcgaaccctccgacaagttgaatcaaca
caatctatgatacgcattgtgggcctatctgctaccctacccaattatatagaggttgca
caatttttgcgcgttaatcctgaaagtggattgttcttttttgattcaagttatcgtcca
gttcccctagctcaacagtacattgggattagtgagagggactatacaaaaaaaatggaa
ctgttcaactcaatatgctatgagaaggtagcagattcattaaagcaaggatatcaagca
atggtttttgttcattctcgcaaggacacagggaaaactgcaagaacactgattgacatt
gcccagaaagcaggcgaactggatttttttatgaatgataaacatcctcaattttctttg
attaagagagaagttagtaagtccaaaagtcgggaagttattgggttatttgaatttggg
tttggtattcatcatgctgggatgcttcgagctgatagaggcttgactgagcgccttttc
tctgacggtctactgaaagttcttgtatgtactgcaactttggcctggggagtaaactta
cctgctcatacagtcatcatcaagggtacacaactatatgatcccaaggctggtgggtgg
cgggacttgggtatgcttgatgttatgcagatctttggtcgtgctggaaggccacagttt
gacaaaagtggcgaaggcattattatgacaactcatgacaaattggcttattatttgaga
ctgttgacaagtcaactccctatagaaagccagttcattaactcattgaaagataatttg
aatgccgaggtggccttgggcacagtaacaaatgtcaaggaagcatgtgcatggcttgga
tatacatatttatttataaggatgaagacaaatcctttggtgtatggagtaacatgggat
gaggttattggagatccttccttgactaccaaacaacgatctcttataactgatgctgca
cgagcccttgacaaggcaaaaatgatgcgatttgatgaaaaaagtggcaatttttactgc
acagagcttggtcgcatagccagccacttttaccttcaatattctagtgttgaaacttat
aatttaatgcttaggcgccacatgaatgatagtgaagtaatcaacatggtggcccattct
tctgagttcgaaaatattgctgttagagaggaggaacaggatgagctggaaaaactgtct
aaatttgcatgcccattagaagtaaagggtggaaccactgataagcatgggaaaatttca
atccttattcaggtgcgcatatcacgtggttcaatagagagcttctctttaatttctgat
gcagcatatatttgtgcaagcttgggtcgtattatgcgtgctttgtttgaaatttgcttg
cgtagagggtggtgcgaaatgacatgtttcatgttggaatattgcaaagctgtggatcgc
caaatttggcctcatcagcatccacttaggcagtttgacagggacctttcactggagatc
ctaagaaaacttgaagaaagaggggctgatttggatcgtctcttcgagatggaggagaaa
gatattggtgctctgattcgttatgctcccggggggaagttggtcaagcaatacttaggg
tatttcccgaacatcattttgtctgccactataagtcctattaccagaaccgttcttaag
gtagatcttcttataactcctgactttgtttggaaggagcgcttccatggtactgctcaa
tgttggttgattcttgttgaggattctgaaaatgaccacatttaccattcagatttcttc
acattgaccaagaggatggcaaggggagactctcagaagatttcttttactgtaccaata
tttgaaccacatccaccacagtactttattcgagctgtttctgattcttggttacatgca
gagtcactgtacactgtgtctttccataacctcacattgccagagacacaaatatcacac
actgaacttcttgatttgaaacctcttcctgtgagtgctcttggcaatgaggcttatgag
aacctatacaaattttcacacttcaatccaatccaaacagaggcttttcatgtcctgtat
cactcaaatgacaatgttctcttgggagccccgactggaagtggaaaaactatatcagcc
gagctagcgatgttacatctattcaacacagaacctgatatgaaggtagtttacattgcc
cctcttaaagctattgttcgggagagaatgaacgactggagaaagcggcttgtttctcag
cttggaaagaagatggttgagatgactggggattttactccagatcttatggcactattc
tcagctgatatcataatttctactcctgaaaaatgggatggtatcagtcgcagttggcat
agtcgaagctatgtgatgaaggttggacttatgatactggatgagatacatttgttagga
gctgatcgtggacccattcttgaggttattgtctctagaatgagatacatatcgtcacag
acagagcgctcgatacgttttgtaggtctatcgacagcattagcgaatgcccgtgatttg
gctgactggttgggtattggagaaaatggtctatttaattttaagcctagtgtgaggcct
gtacctcttgaagttcacattcagggatatccggggaagttttactgtccaagaatgaat
agtatgaacaaacctgcatatgctgccatatgtactcattcgcctgcaaaaccagttctt
atttttgtttcatctcgccgtcagacaagacttactgcactagatctcattcagcttgct
gcatcagatgaaaatcccagacagttccttaatatgtcagaggcaacactggaaatggtt
ctttcacaagtcactgacaacaacttgagacatactctgcaatttggaattggactgcac
catgcaggattgaaagatagagacagatccttggttgaggaactcttttcaaataacaag
atccagatattggtgtctaccagcaccctggcttggggtgtaaaccttccagcttttcta
gttatcattaagggtactgaatattatgatggaaaagcaaagagatatgttgatttccct
attacagatattttgcaaatgatgggtcgtgctggtcgacctcaatatgatcaacatggg
aaggctgttattcttgttcatgaaccaaaaaagagcttctacaagaagttcctttatgaa
ccattccctgttgaaagtaatctgagggaacatttgcatgatcacatcaatgcagaaatt
gtttctggtacaatctgtcacaaggaggatgcagtgcattatcttacttggacatatctg
tttcgtcgattggttgtaaatccggcttattatggattagaggatactgaagccagtgct
ttaaattcttacctctcaaggttagtgcaaagtacttttgaagatcttgaggacagtgga
tgcataaaattcaatgaaaattttgtggaacctttgatgttgggttcagtagcatctcag
tattatctgagttacatgacagtatctatgtttgggtcaaacataggcccaaatacttca
ctagaagttttcttgcacattctttctgctgttgctgaatttgatgaacttcctgtacgt
cataatgaggaaaatatcaatagaacattatctgaaaaggtcccatatctcgttgatcaa
caccatcttgatgacccgcatgtgaaagcaaatttgctctttcaggcacacttctcccgc
attgaattgccgattagtgactatgtcacggatttaaaatctgttcttgatcaaagtata
cgtatcatccaggctatgattgacatatctgcaaatagtggatggctttcaagcacaatg
acttgtatgcatcttttacaaatggtcatgcagggtttgtggtttgaaagagattcatcc
ctgtggatgttgccttgcatgaacaatgatcttttcagtcatatcaagaaagctggtatc
tcaactctgcaggacctactgtatcttcccgatgcaaatttgcagaggttgctccgacag
tttccttctccagagttataccaggatcttcagcagtttccacgtgttcaagcaaaattg
aagcttcaagaggaagatggccaaaagtctccaattcttaacattagattggaaaaaatt
aattccaagtgctcgacatcaagagcattcgcccctagattcccaaaggtaaaagatgaa
gcttggtggctagttttgggaaatgtcaccacctcagagctatatgctctgaaaagagtt
agtttctctgacagattgttcactcgcatggagctaccaccaacagtgatcaatctccag
gagacgaagctaattttagcatcagattgttatcttggactcgagcaggagcactccata
ggagaatctaagaatcaattttcataa
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integrated database retrieval system
