Phoenix dactylifera (date palm): 103711356
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Entry
103711356 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 20-like
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103711356
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103711356
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
RYDR_ITPR
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
103711356
NCBI-ProteinID:
XP_038982198
UniProt:
A0A8B9AE24
LinkDB
All DBs
Position
4:complement(28967049..28991842)
Genome browser
AA seq
2596 aa
AA seq
DB search
MAISQSRAVKCLNTSSGRRRFVFKSFSQRVEEIDIDVFRSLEPVKTQPSSGSSFFRESLV
QWRELNTAEDFISFYDEMMPLVQTLPQVILHREKIFLELLRRLNMKARLSLEPILMLVAA
LSRDILEEFLPFLQRFTGFLLDLLKNGVDRDPEILEQVFTSWSYILMYLQKYLXKDVVHI
LKITVQLRFFPKDYIQEFMAESVSFLLRNAPIHQLTKGIAFLIFEVAKTSSSVRITGVTA
LLWHVMRGTSSRLHSRAKKVLQFLMDKSIVNIRNKYPQGLEAFLEVVTGILHRFCNELDH
KELKVVYDCLFREISGCMSDGCLVHLNHMLGLLTFTIHNSNKSSVFEDMSSEVHDRILQL
MICXLDLPLTSSELSSISLLYAPAFKFRSSSLFDFIKGVLLKDPHIANVFRSHIIRQSST
FDVDILERQSKQLHFDILDGVPVDKEQKICIFFKKTLAYWTNLISDVATSGNQLEKQVSE
SEVAILWGVVRCYLIFNIYQIXLAWIKDLVATLDQLVEIEAGNSYHKLLLSKQLGHSETS
NFLRLAKRHKTSLQVLSAVAEFLDSMFRYIDLHFSIVTNFVIELLLLAETTPISVSTSRK
ITILISRIQMVFLQQQSMMVHPLXLYGIIGILHNRFGLLWEPALECLTILIGRYKELVWN
XIVQYLGNYQSKFLSSGDQLMKVNLESHQPNNLVGCFNMFLYPDSDSTPCNTITTLLLQS
LQKIRDIAESRSRQIIPLFLNLLGYDDENILSVXDVQLPXMLKEKSGKLLLKEWLNLLRL
MHNARSLYRSLVLKQVLMKRLLDDIDPDVQSKALDCLLNWKDDFLTPYDQHLKNLIISKN
LREELTIWALSKESQTIQEGHRGHLIPLIIRLLTPKXRNLKALGSHKHTSLNHRRAVLYF
LAQLDVDELQLFFSLLLKPLLAGTMEVLEDQPDRPSEKFTDRFHSSVFVKVSTLVTVSEL
SWKKGNGFLHVLEDILKTFDEFHVKPFLNPLMMIVVRILESCMLNIMGDNNKRGGSVGDN
SAGDSEVRETSTLVPDPLMMSTSIKQFKDLRSLCLKIISFALSRYEFHDFGSDFWDXFFI
SVKPLIDSFKQEGSSSERPSSLFSCFIAMSRSPMLVSLLIREANLVPTIFSILTVRTASD
AILSSVLNFIENLLNLDSDLDHQEDNSVKKVLVPHLEVLINSLRELFQSRKESHRNSTLW
PGKTELRIFKLLVKYINNGAAAGFIDILLPFFKKKDISADECMEGLHVIKGVLPVLDYET
SGKILNAINPLLVSAGLDLRLCICDVLDGLTIINPSLTFLGRLLHELNAVSSSEIGELDY
DKRIGAYDTIRPELFTQLREEHALAILSHCVYDMSSEELIFRQSATRALLSFIQFAGSIV
NRETSDCQELLLHDGAQEDVTNQTVEKSNTSSTWTNACIQQIVKKTLLQNMGEAMSKDIS
IQKEWIALLREMVYNLQGIPSLNTFRPLCSEDPEVDFFNNILHLQIHRRRRALSRFRNVI
SAGKLAENVTAKIFLPLFFNMLFDVKDGKGEDLRNACLETLASMSGQMDWETYRTFLMRC
FREMTLKPDKQKILLRLICAILDKFHFTSVNSRLVIDGIEIHASGDTDGNVGIALPASSS
EPNVPSDIAVYLQKKFLPQVLKLLTSESEKVNVNISLAAIKLLKLLPVETLESQLPSIIH
HTCNFLKHRLESVRDEARAALAACVRELGLEYLHFIVKVLRAILKRGYELHVLGYTLNFI
LSKTLAYPSVGKLDYCLEELLSIAENDTLGDVAEEKEVEKIASKMKETRKNKSFDTLKLI
SQSITFRTHASKLLSPINAHLQKQLTPKMKVKLEMMLHHIALGIEHNPSVELSELFIFVY
GLIEDSMTEEGSHGKEMSMNGTSNKPFHEMPNKRNTLSSGDHGLQNSHLISEFALGVLHN
RLKNMKLDKKDEQLLSMLDPFVKLLGNCLNSKYEKVLSAAFRCLAPLIRLPLPSLEAHAD
KIKILLLDIAQKSGNANSLLVQSCLKLLTVLLRSTKISLSNDQLCMIIQFPLFIDLQTNP
SPIALSLLKSIVGRKLVVHEIYDIAVQVAEVMVTSQSEPIRKKCSQILLQFLLDYRLSDK
RLQQHMDFLLTNLSYEHSSGREAVLEMLHAILVKFPKSVVDSQAQTFFLHLVVALANDHD
QKVRSMVATVIKVLIGRTSHHALHSILDYSLSWYLSEKKHLWSAAAQVLGLLVEVLRKDF
RRHINSILKVAKGILESSVYAVNNKEFDSTNDPAIPFWKEAYCSLVMLEKMLLHFPELYF
DKNLEEMWGCICKLLLHPHVWLRNISNRLVALYFAAVSDPGRTDIEKSNIGTLFLVNPSR
LFAVAASLLNQLKVQLDDDAASNLITQNLVFSICGLHSFAKQRNSLTLHEFWCTLDSCEQ
GSYLEAFELLGSRKIKNAFILSTSTTSQSSGERELADEVDADDFQSLLVAPLLKRMGKVA
MQKEDIQMKIIFNCFRMISSQIGSEGCNAYAIDMLVPLYKVCEGFAGKLVGDEIQQLAVE
VRDSIRDVLGVDDFVRVYNLIRKNLKAKRDKRRHEQKLVAVINPMRHAKRKLRIAVKHRA
HKRRKITAMKMGRWRR
NT seq
7791 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctcgcagtcgcgggcggtgaagtgcctcaacacgtcctccggccgaaggcgc
ttcgtcttcaagagcttctcccagcgagtggaggagatagatatcgatgtcttccgtagt
ctggagccggtaaagacccagccctccagcgggtcctctttcttccgcgagagcctagtg
cagtggcgagagctgaacacggcggaggattttatttcgttttacgatgagatgatgccg
ttggtgcaaactttgccacaggttatactgcaccgggaaaagattttcttggagcttctc
cgcagattgaatatgaaagcaagattgtcccttgaaccaatactaatgttagtcgctgct
ctgtccagagatattctggaagaatttctaccattcttgcaaaggttcactggtttttta
cttgatcttctcaaaaatggtgttgatcgtgatcctgaaatcctagagcaggtcttcaca
tcttggtcatatatcttgatgtatttgcagaaatatcttngtaaggatgttgttcacatt
ctcaagattactgtccagttaagattttttccaaaggattacatccaagagtttatggcc
gagtctgtttcttttttactaaggaatgcgcccattcaccaacttacgaaaggtattgct
tttcttatttttgaggttgctaaaacttcatcatctgtaaggattactggagttactgct
ttgctgtggcatgttatgagagggacttcctccaggcttcactcaagagctaaaaaggtg
ttgcagtttttgatggataagtccattgttaacattagaaataaatatcctcaaggtctc
gaagcttttcttgaggttgtaactggtattcttcatagattttgcaatgagcttgatcat
aaagaattgaaagtggtatatgattgtttatttagagaaatatctggatgtatgagtgat
ggttgcttggtgcacctaaatcacatgctggggcttcttacatttaccatacacaatagc
aataagagcagtgtttttgaagatatgtcttctgaagttcatgatagaattttgcaacta
atgatttgcnctctagatcttcctctcacttcttctgagttatcaagcatctcactgtta
tatgctcctgcatttaagttcagaagctcgagtttgtttgactttattaaaggtgttctt
ctgaaggatcctcacattgcaaatgtcttcagaagtcatataattaggcaaagttctact
tttgatgttgacattcttgaaagacaaagtaagcagctacactttgatatcctagatgga
gtacccgtagataaggaacagaaaatatgcattttctttaagaagacactcgcttattgg
accaacttaataagtgatgttgcaacgagtggcaatcaattagagaagcaagttagtgag
tctgaagtagctatcttatggggagtcgttagatgctacctcattttcaacatctatcag
atanatttagcatggataaaagatttagttgccacacttgatcaacttgtggaaattgaa
gcaggtaattcatatcataaattattgctaagtaagcagcttggacattcagaaacaagt
aattttttgcgtcttgctaagagacacaagacatccctgcaagtattgtccgctgtagct
gaatttttggattctatgttcaggtacattgatctgcatttttcaattgttaccaatttc
gttattgagctcctccttttggctgaaacgactcctatttcagtctcaacaagtcggaaa
attactatcctgatatccagaatacagatggtctttcttcagcaacaatcaatgatggta
catcctcttnctctatatgggattatcggcatcttgcataatcgctttggtcttttatgg
gagccggcattagagtgcctgaccattctgataggcagatataaggagctagtttggaat
natattgttcagtatcttggcaattatcagtcaaaatttctatcctccggcgatcagttg
atgaaagtgaatttggaaagtcatcagccaaataatttggttggctgctttaacatgttc
ctatatcctgattctgatagcacgccatgcaataccataacaactctattgcttcaatca
cttcaaaaaattcgggacattgcagaatctcggtctcgacagattatacctttattcttg
aatttattgggttatgatgatgagaatatcttaagtgtttgagacgttcagctgccataa
atgttaaaggaaaagagtggaaagttacttctcaaagaatggctgaacttgttgagatta
atgcacaatgctcgatctttatatcgaagcctggttctgaagcaagtgttgatgaaaagg
cttctcgatgatattgatcctgatgtacagtcgaaagctctggattgcttattgaactgg
aaggatgactttctgactccatatgatcagcatttaaaaaatcttatcatttccaaaaac
ctccgagaggagctcacaatatgggctctttcaaaagagtcccaaacaattcaggaagga
catagggggcatttgattcctttaattattcggttactaacaccaaaangcaggaatctg
aaagcacttggctcgcataagcatacaagtttaaatcaccgtagggctgtcctttatttt
ttggcgcaactcgatgttgatgaacttcagctatttttctctttactactaaagccctta
cttgccggtacaatggaagttcttgaagaccagcctgacagaccatctgaaaagttcaca
gacagatttcattcatctgtttttgtaaaagtttcaacattagttactgtatccgagctc
tcatggaagaaggggaacggatttctgcacgtacttgaagatattttgaaaacatttgat
gaatttcatgttaagccatttcttaatccattgatgatgattgttgttcgaatactggaa
agctgcatgttgaacattatgggtgacaataataagagaggtggctctgttggagataat
tctgctggtgactcagaggtccgtgagacaagtactttggtgccagatcctcttatgatg
agtacctccatcaaacagtttaaggacttgcggtccttgtgcctgaaaattatttctttt
gcactaagtagatatgagtttcatgactttggttcagacttctgggacnatttttttatt
tctgtgaagcctcttattgacagcttcaagcaggagggttccagtagtgaaagaccaagt
tcactcttttcatgctttattgcaatgagccgaagccccatgctagtctcgctattaatt
agggaggcaaatcttgttccaacaattttttccattttaacagtgaggactgcatctgat
gccatcttatcttctgtactgaatttcattgagaatctgttgaacctggacagtgatttg
gaccatcaagaggacaattcagtaaaaaaagttttggtgcctcatcttgaggtactcatt
aatagtttacgtgagctttttcagtcccgcaaagaatctcacaggaattctacattatgg
cctggaaagacagaattgaggatattcaaacttttggtgaaatacatcaataatggtgcg
gcagcgggattcatagacatattgctcccatttttcaaaaaaaaagatataagtgctgat
gagtgtatggaaggtttgcatgtcatcaaaggggtcctgccagttttagattatgaaaca
tcagggaagattttgaatgcaattaacccattgcttgtttctgctgggttggatctccgc
ttgtgcatctgtgacgttcttgacggcctcacaataatcaatccttcattaacctttctg
ggtagacttctacatgagttgaatgcagtttcttcctcggaaattggtgagctcgattat
gataaaagaattggtgcctatgatacaataaggcccgagttattcactcaactcagagaa
gagcatgcattagccatattatctcactgtgtatatgacatgtcatctgaagaattgatc
tttcggcaaagtgcaactagagcactgctctcatttatacagtttgctggatcaatagta
aatagggaaacaagtgattgccaagaattgctgttacatgatggagcacaagaagatgta
acaaatcaaactgtggaaaaaagtaatactagttctacttggacgaatgcctgtattcag
cagattgtgaaaaaaactctgctgcagaatatgggtgaagctatgagcaaggatatttcc
attcagaaagaatggattgctctactacgggaaatggtttataatcttcaaggaattcct
tccttgaatacatttagacctctgtgtagtgaggatcctgaagtagatttcttcaacaat
attcttcacttgcagatacatagaagaagaagggcattgtcacgtttcagaaatgtcatc
agtgctgggaaattggcagagaatgtgactgcgaaaatctttcttccattgtttttcaat
atgttgtttgatgtcaaagatggaaagggagaggatctaaggaatgcatgcttagagaca
cttgcttctatgtctggtcaaatggattgggaaacctatcgcacctttttgatgagatgc
ttccgtgaaatgacccttaagccagataaacaaaagatcctgttacggttaatatgtgcc
atattggacaagtttcattttaccagtgtgaattctagactggtgatagatggaattgaa
atccatgcttctggtgacactgatgggaatgtgggaattgcattgcctgctagttcttct
gaaccgaatgttccttctgatatagcagtctatttgcaaaagaaattccttccacaggtt
ctgaaattgctgacatcagaatcagaaaaggtcaatgtcaacattagtcttgctgccatc
aaattacttaagttgctaccagtggagactctggaatcacaacttccaagcatcattcat
cacacttgtaactttctaaagcatcgtctagaaagcgtacgtgatgaagcaagggctgct
ttagctgcatgtgtaagggaactgggactggaatacttgcacttcattgtcaaggttttg
cgagcaatactaaagagggggtacgaattgcatgttttgggatataccctcaatttcata
ttatctaaaactcttgcatatcccagtgttgggaagcttgattactgtttggaagagttg
ctctctattgctgagaatgacactctgggggatgttgctgaggagaaagaagttgaaaaa
attgcttcaaaaatgaaagagacaaggaagaataaatcttttgatactctaaagttgatt
tctcagagcattactttcagaacacatgcctcaaagttgctttccccaattaacgcacat
cttcagaaacaactcacaccaaagatgaaggtgaagcttgagatgatgttacatcatata
gctttaggaattgaacacaatccttctgtggaactgtcagaactatttatttttgtgtat
gggctgattgaagatagcatgacagaagagggttctcatggcaaagagatgtccatgaat
gggactagcaacaagccttttcatgaaatgcccaacaaaagaaacactttaagctctggt
gatcatggactccaaaattctcaccttatttccgaatttgcccttggagtattgcataat
cgcttaaagaatatgaagttggacaagaaagatgagcagttgttatcaatgctagacccc
ttcgtaaaactattaggaaactgtctgaattccaagtatgaaaaagttctatcagctgct
ttcagatgccttgctccattgataaggctacccttgccatcccttgaagcccatgctgat
aaaattaaaattttgcttctagatattgcccaaaaatcgggaaatgctaacagtttattg
gttcaatcctgtctaaagcttctcacagtgctacttcgaagcaccaaaatttcactttca
aatgatcaactctgcatgatcattcaatttcccctttttattgatctccaaactaatcct
tcacccattgccctttctcttttaaagtcaatagttggtcgaaagttggttgtccatgaa
atatatgacattgctgtgcaagttgcggaagtaatggtaacaagccagtcagaaccaatt
cgcaagaaatgcagccaaattctattgcaatttctgctggattatcgtctttcagataag
cgcttgcaacagcatatggacttcttacttacaaatttgagctacgagcattcgtctgga
agagaagctgtgcttgaaatgctccatgctatcctagtcaaatttcccaaaagtgttgtt
gatagtcaggctcaaacattttttctccatttagtagttgctttagccaatgaccatgat
caaaaagttcggtctatggttgctacggtaataaaagtattgataggtcgcaccagtcat
catgcactgcattccattctagactacagtctttcatggtatttgagtgaaaaaaagcat
ctatggagtgctgcagctcaggttcttggtttattggttgaagttttaagaaaagacttc
cgtagacacataaatagtatcctcaaagttgcgaaaggcattttggaatcttctgtgtat
gctgttaacaacaaagaatttgactctacaaatgatcctgcaattccattctggaaagag
gcttactgctcactcgttatgctggagaagatgcttctccacttcccggagctgtatttt
gacaagaaccttgaggagatgtggggatgtatttgtaaacttttgctgcatccacatgta
tggttgcggaatatttccaaccgccttgtagccttgtatttcgctgctgtgtccgaccct
ggcagaactgatattgagaagtcgaacattggaactctgtttcttgtaaatccaagcaga
ctttttgcagttgctgcttccctattgaatcagctcaaggtgcagctggatgatgatgca
gcgagcaatctcataactcaaaatctcgtattttccatttgtggtttgcactcttttgct
aaacagagaaatagtttgactctgcatgagttttggtgtactcttgattcttgtgaacaa
gggtcataccttgaggcttttgagttgcttggttcaaggaaaataaagaatgctttcata
ctttccaccagcactacaagtcaatcttctggagaaagggaactagctgatgaagttgat
gctgatgattttcaatcattgctagttgcacccctgctcaagaggatgggaaaagttgca
atgcagaaagaagatatccagatgaagatcatcttcaattgcttcagaatgatctcatct
caaattggttctgaaggctgcaatgcttatgctattgacatgttggttccattatataaa
gtatgtgaaggattcgctgggaagctcgttggtgatgaaattcagcaattggcagtggag
gttcgtgacagcataagggatgtccttggggttgatgatttcgtgcgagtttacaacctg
atacggaagaacctcaaggcaaagagggacaagagaagacacgagcagaaactcgtcgct
gttatcaatcctatgcgccatgccaagaggaagctgcggattgcagtcaaacatcgagcc
cacaagaggaggaagataacggcaatgaaaatggggagatggcgaaggtaa
DBGET
integrated database retrieval system
