Phoenix dactylifera (date palm): 103711442
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Entry
103711442 CDS
T03274
Name
(RefSeq) pre-mRNA-splicing factor 38
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103711442
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103711442
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103711442
Complex C
U4/U6.U5 tri-SnRNP related factors
103711442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
103711442
NCBI-ProteinID:
XP_008795803
UniProt:
A0A8B9A442
LinkDB
All DBs
Position
Unknown
AA seq
392 aa
AA seq
DB search
MANRTDPAAKSIHGTNPQNLVEKILRSKIYQNTYWKEQCFGLTAETLVDKAMELDHLGGT
YGGNRKPTPFMCLVMKMLQIQPEKDIVVEFIKNEDYKYVRVLGAFYMRLTGSVTDVYQYL
EPLYNDYRKLRRKLPDGKFCLTHVDELIDELLTRDYSCDVALPRVQKRWTLEASGILEPR
RSALEEDFEEEEEKEEDEQAMDAYEADTHEKDYYHGRSPTRERDRDRKRDSYRYHRDRDY
DRDYGRGRERDRDRDRERDRDRDRERDRDRDRDRHRARDEKDYGRERERERDRDGRERER
RDRDRGRRRSRSRSRSRDRRERDREDGDYRKRRARGSVSPRRRPEEDGGAREEPRRKKEK
KEKKSDGTDHPDPEIAEANRLRASLGLAPLKL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccggacggatccggcggcgaagagcatccacgggacgaacccgcagaacctg
gtggagaagatcctgcggtcgaagatttaccagaacacctattggaaggagcagtgcttc
ggtctcaccgcggagacgctggtggacaaggccatggagctcgaccatcttggcggcacc
tacggcggcaaccgcaagcccacccccttcatgtgcctcgtcatgaagatgcttcagatc
cagcccgagaaagacatcgtcgtcgagttcatcaagaacgaagactacaagtatgttcga
gttctcggggctttttacatgcgtctcaccgggtcggtcaccgatgtgtatcagtatctg
gagccgctctacaacgattaccgcaagcttcgccggaagctacctgatggaaagttttgc
ttgactcatgtggatgaactcattgacgagctcctcacaagagattactcctgtgatgtt
gctcttccacgggttcagaagaggtggactcttgaagcttctgggatattagaacccaga
agaagtgctttagaagaagattttgaagaggaagaagaaaaagaagaggatgagcaagct
atggatgcctatgaagctgacactcatgaaaaggattattatcatggacgaagtcccact
agggaaagagatagggacagaaagcgggacagctatcgatatcacagggacagagactat
gatcgagactatggaagaggacgcgaaagagatcgagatcgggatagagaacgtgataga
gatagagatagagaaagagatagggacagagatagagaccgccatcgtgctagagatgag
aaagattatggtcgagagagggaacgagaaagggatagggatggtagagagcgggagaga
agagaccgagaccgtggacggcgtaggagtcgttcaaggagcaggagtagagatcgccgt
gaacgagaccgtgaagatggtgattaccgtaagaggcgtgctcgtggcagtgtaagccct
cggaggcggcctgaggaggatggtggtgctcgggaggagcccaggaggaagaaggaaaag
aaagagaaaaagagtgatggaactgatcacccagatccagagattgcagaggctaacaga
cttcgtgcctcgcttggactggcacccctgaagctgtga
DBGET
integrated database retrieval system