Phoenix dactylifera (date palm): 103711508
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Entry
103711508 CDS
T03274
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103711508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103711508
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103711508
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
103711508
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
103711508
NCBI-ProteinID:
XP_008795897
UniProt:
A0A8B7CC03
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All DBs
Position
1:22069187..22080533
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AA seq
1114 aa
AA seq
DB search
MEEISTEHQPSIPSPADGAGPSSSPQPASPSVSPAGAGARFDDDEEDEGDVCRICRNPGD
AGNPLRYPCACSGSIKFVHQDCLLQWLNHSNARQCEVCKHTFSFSPVYAENAPARLPFQE
FVVGMTMKACHVLQFFLRLAFVLSVWLLIIPFITFWIWRLTFVRSLGEAQRLFLSHISAP
LILTDCLHGFLLSASIVFIFLGATSLRDYFRHLRELGGHDAERDDEGHERHGARAVRRFP
GPANRIAAGDGNAEDGGGAQGIAGAGQLIRRNAENVAARLEMQAARLEAHVEQMFDGLDD
ADGAEDVPFDELVGMQGPVFHLVENAITVLASNAIFLGVVVFIPFSLGRIVLYYLSWFFS
SASSPMLAKVMPLTESALSLANITLKNALTAVKNLSAESDNASVLGHVVDVVAGSLKVNA
TGLDEVSNSVRTPLASDLLKGTFAGYSRLSDVTTLAVGYMFIFSMVFFYLGLLALIRYAK
GERLIIERLYGIATIAEAIPSLFRQFVGAMRHLMTMVKVAFLLVIELGVFPLMCGWWLDV
CTLRMLGATISQRVEFFSVSPLASCFIHWLVGIIYMLQISIFVSLLRGVLRNGVLYFLRD
PADPNYNPFRDLIDDPVYKHARRVLLSVAVYGSLIVMLVFLPVKLAMQLAPSMFPLDITV
FDPFTEIPADVLLFQICIPFAIEHFKPRATIKSLLHHWFTAVGWALGLTDFLLPRPEENA
GQEIGNGELARQDRMHDARQGRVGQPDQPLARLIAADDHNRRGHPIGNADVAEDFDVDDQ
TDSEYGFVFRIVLLLMLAWMTLLLFNSTLIVVPISLGRMLFNAIPRLPITHGIKCNDLFA
FSIGCYIIWAVVAGTRYSIEYIKTRRAHVLVSLIWKWYVIVVKISALLSIWIFVIPVLIG
LLFELLVIVPMRVPVDESPVFLLYQDWALGLIFLKIWTRLVMLEQMAPLVDESWRRKFER
VREDGFFRLRGLWVLREIVIPIVSKLLTALCVPYVFSKGIFPVLGYPLIVNSAVYRFAWL
GCLLVSMVCFCARRFHVWFTNLHNSIRDDRYLIGRRLHDYGEETPEESSESEIIPHNRDI
IPADAALIQHEREADGLRHRRLNQRPNHQQRLAI
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atggaggagatctccaccgagcaccagccctctatcccttcccccgccgacggggccggc
ccctcctcgtcgccccagccggcgtcgccgtcggtgagccccgctggcgccggcgcccgc
ttcgacgacgacgaggaggatgagggagacgtgtgccggatctgccgcaaccccggcgac
gccgggaacccgctccgctacccctgcgcatgcagtggcagcatcaagttcgtccaccag
gactgcctcctccagtggctcaaccacagcaacgctcgccagtgcgaggtgtgtaaacat
acattttctttttcccctgtttatgctgaaaatgcccctgcaagacttcccttccaggag
tttgtggttgggatgaccatgaaagcatgtcatgtcctgcaatttttcctccggcttgct
tttgttctttctgtttggctccttataataccttttatcacattttggatatggcgtttg
acgtttgtgaggagtcttggtgaagctcaaaggctgtttttgagccacatatctgcacct
ttgattctcactgattgcttacatggcttcctgctttctgctagcatcgtgtttatattt
cttggggcaacgtcattaagggattattttagacacctccgtgaacttggaggacatgat
gctgaaagggatgatgaaggtcatgaaaggcatggcgctcgtgctgtgagaagatttcct
ggccctgctaataggatagctgctggtgatgggaatgctgaagatggaggtggtgcccaa
ggaattgctggggcaggtcaacttataagaagaaatgcagaaaatgttgccgcgcggttg
gaaatgcaggctgcccgtcttgaagcacatgttgaacagatgtttgatggattggacgat
gcagatggtgcagaagatgtaccatttgatgagcttgttggcatgcaagggcctgtattc
catttggtggaaaatgctataacagtactggcaagcaatgcaatattcctgggtgtagta
gtttttattcccttttcattgggaaggatagtactctactatctatcatggttcttttca
tctgcatctagtccgatgttggcaaaggtcatgcctcttacagaatctgctctttccttg
gctaacattaccttgaagaatgcacttactgctgtaaagaacttgtcagctgaaagtgat
aacgcaagcgtacttgggcacgtggtggatgtggttgcaggatccttgaaagtaaatgcc
actggactggatgaagtctcaaatagtgttagaacgcctcttgcatcagatctattgaaa
ggaacatttgctggttactcacgtctttcagatgtcactacacttgcagttggatatatg
tttatattttctatggtgttcttctaccttgggctcctcgctttgattcgatatgctaag
ggtgagcgcctgattattgagaggctttatgggatagctacaatagcagaggcgatccca
tctcttttcagacaatttgtgggagcaatgagacatctgatgactatggttaaagtcgct
tttcttctggtgattgaacttggggtctttccattgatgtgtgggtggtggcttgatgta
tgtactttaaggatgctgggtgcaacaatttctcaaagggtggagttcttttcagtgtca
ccattagcaagctgttttatccattggcttgttggaatcatttacatgcttcagataagc
atttttgttagccttcttcgaggggtcttgagaaatggagttctatattttcttcgggac
ccagcagatccaaattataatccatttcgcgatttaattgatgaccctgtgtataaacat
gcccggcgagttttgctttctgttgctgtttatggaagtttgattgtgatgttagtcttc
ttacctgtcaaacttgctatgcaattagcaccttccatgtttccattggacatcactgtt
tttgacccttttactgagattcctgcggatgtgcttctgttccaaatctgtattccattt
gcgattgagcatttcaaaccgcgagcaacaattaaatcccttttacatcattggttcacg
gctgttggctgggctcttggcttaactgatttcctactacctagacctgaggaaaatgct
gggcaggaaattgggaatggagaactagcaagacaggatagaatgcatgatgcacgtcaa
ggcagagttgggcagcctgaccagcctttggcacggttaattgctgctgatgatcataac
aggagaggtcatcctattggaaatgctgatgttgctgaagattttgatgtagatgatcaa
acagattctgagtatggttttgtattccgtattgtgttattgctgatgttggcatggatg
actcttctgctctttaactccacattgattgttgtgcctatttcacttgggcgcatgctg
tttaatgccatccctcgccttccaattactcatggtatcaagtgcaatgatctatttgca
ttcagtattggttgttacatcatctgggctgttgttgctggaaccagatactcaattgaa
tatattaaaacccggcgagcacatgttctggtatcgctgatttggaagtggtatgttatt
gtcgtcaaaatttctgccctactttctatatggatctttgttatccctgtgctgattggc
cttctttttgagcttctggtgattgtaccaatgagggtgcctgtggatgaaagcccagtc
ttcctgctataccaggattgggctttgggtctgatatttctcaagatatggactagactg
gtcatgctggagcagatggcaccattggtagatgaaagctggcgtagaaagtttgaaagg
gtgagagaggatgggttcttccggctgaggggcctttgggtcctgcgtgagattgtgata
ccaattgtctcaaagctgttgactgctctctgtgtgccttacgtgttttccaagggcatt
ttcccagtcttgggctacccattaatagtgaactctgctgtgtaccggtttgcctggctg
ggctgtctccttgtcagtatggtgtgcttctgtgccaggcggttccacgtttggttcacc
aacctccacaattccataagggatgaccgctatctgataggccggaggttgcatgactat
ggggaggaaactccagaggaaagcagtgagtcagagatcattccacataaccgagacatt
atcccagctgatgctgctctgatacagcatgaacgagaagcagatgggcttaggcatcga
cgacttaatcagcgccctaaccaccaacagaggttggccatataa
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