Phoenix dactylifera (date palm): 103711579
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Entry
103711579 CDS
T03274
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 2, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103711579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pda03019
]
103711579
03016 Transfer RNA biogenesis [BR:
pda03016
]
103711579
Enzymes [BR:
pda01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
103711579
Messenger RNA biogenesis [BR:
pda03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103711579
Transfer RNA biogenesis [BR:
pda03016
]
Prokaryotic type
tRNA degradation factors
103711579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
Urease_gamma
S1_RRP5
Ribul_P_3_epim
Motif
Other DBs
NCBI-GeneID:
103711579
NCBI-ProteinID:
XP_008796014
UniProt:
A0A8B7CC52
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All DBs
Position
15:11865638..11880210
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AA seq
990 aa
AA seq
DB search
MAAAAAAALRGRAYPLMASVPSFLTWRRLGFRSFCSGRLGFLSQPPEMESLAPAGPVPGL
KVLETFREEFEIGSRTISLETGKIARFANGSVVITMDETNVLSTVASARGDGARDFLPLT
VDYQEKQYAQGVIPTTFMRREGAPKERELLCGRIIDRPIRPLFPPGFYHDVQVMVNVLSS
DGKHDPDVMAANATSAALMLSDVPWNGPIGVIRVGRIDGKFVFNPTMNELSLSDLNLIYA
CTRDRTLMIDVQAREISEKDLEAGLKLAHPEAVKYIDPQIRLAEKAGKKKKEYKLSMISD
RTLEKIRSLAEAPIEAVFTDSTYGKFERGEALDKITQAVKAKLEEESDEESLNVLPKAID
TVRKKTIRHRIIKEGIRVDGRQLDEVRPLYCESGTYPILHGSSLFSRGDTQVLCTVTLGA
PGDAQRLDSIVGPPTKRFMLHYSFPPFSINEVGKRGGLNRREVGHGTLAEKALLAVLPPE
DDFPYTVRVNSEVMASDGSTSMATVCGGSMALMDAGIPVREHVAGVSVGLVTEVDPSTGM
INDYRILTDILGLEDHLGDMDFKIAGTRKGITAIQLDIKPAGIPLDIICECLEPAQKGRN
HILDRMEREICAPRTMGDGSTPRLATLKFSYDSIRRLLGPLGSQRKKIEQETGARIAVSD
GTITIVAKNQSVMEKAKEKVDFLIGREIEVGGIYKGVISSIKEYGAFVEFNGGQQGLLHI
SELSHEPVSRVSEVVTVGQELSLMCIGQDVRGNIKLSLKAMLPRAGSEKKNLESQDSVAP
KQEVNVWASVENVPTCQVDEESEVEPATNSTPAVVIRSAAECDAQDIAAGQHSIKKSGKG
AKTSPRPYNASSRHRDDFRSTPTNRKRAPNQTQMKKENELKDYCGSKPETDSRPGNLLHV
LMQNDADEKPKSFGSTSVRAGSLKLGDRVTAKIYQIRAHGLVLELGGGVRGMYKFEVNGR
RDFEVGKELPVQCSSFSSKGIPVFSLLEDE
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcggcggcagctctgagggggagggcttaccctctgatggcgtcggtg
ccctccttcctcacgtggcgccgcctcggcttccgttccttctgcagtggccgcctcggc
ttcctctcccagcccccggagatggagtccctggcccctgccggcccggtccccggcttg
aaggtcctggagaccttcagggaggagttcgagatcggatcccgcaccatctccctcgag
accggcaagatcgccaggttcgccaacggatccgtcgtcatcaccatggacgagaccaac
gtgctctccactgtcgcctccgcaaggggggatggggctcgcgacttcttgcccctcacc
gttgattatcaagaaaagcaatatgcacaaggtgtcattcctaccacattcatgcgcagg
gagggtgcccccaaggaacgtgaacttttatgtggtcgtattattgaccgacccatccgc
ccactctttcctcctggcttttaccatgatgtccaggtcatggtaaatgttctttcttct
gatgggaagcacgatccagacgtaatggcagcaaatgccacatctgctgctcttatgcta
tcagatgtcccttggaatgggcccattggagtgatacgtgtggggaggatagatgggaaa
tttgtttttaatccaaccatgaacgagctaagcttaagtgatctcaacttgatctatgca
tgtacaagggacaggacgctaatgatagatgtacaggctcgtgagatctcagaaaaagat
ctagaagctggattaaagcttgcacatcctgaggctgtcaaatacatagacccccagatt
agattagctgaaaaagctggcaaaaagaagaaagaatataaattatcgatgatttcagat
aggacactggagaagatacggagcttggcagaagcacctattgaagctgtctttacagat
tcgacttatggcaagtttgaacgtggagaggccttggataaaattactcaagctgtaaaa
gccaaacttgaagaagaaagtgatgaagagagcttgaatgttctgccaaaggcaattgat
acggttaggaaaaagacaattcgccataggatcatcaaggaaggtattagagtcgatggt
agacaacttgatgaagttagacctttgtattgtgaatctggtacatatcccattttacat
ggatcatcacttttctcgcgtggagacactcaggtactatgcacagttacacttggggct
ccaggagatgctcaacgactggactctattgttggcccccctacaaaacgtttcatgctt
cactatagttttccaccattctcaatcaatgaggttggcaagcgcgggggtttgaatagg
cgtgaagttggacatggtactctggcggagaaggctttgcttgctgtattacctccagaa
gatgacttcccatacactgttcgtgtcaattcagaagtcatggcctctgatggttctact
tccatggcaactgtatgtggaggaagtatggctttgatggatgctggcattcccgtaagg
gaacatgtagctggtgtctcagtgggccttgttacagaagtggatccatcaactgggatg
ataaatgattatcgcatactgacagatatattgggtcttgaagatcacctgggggacatg
gacttcaaaattgccggaacaagaaaaggaattactgcaattcagttagatataaaacct
gctggaatacctctagacataatttgcgaatgtttagaaccggcacaaaagggtcgcaat
catatccttgaccgcatggagcgagaaatatgtgcaccacgtaccatgggtgatggaagt
acccctcgattagcaactttgaagtttagctatgactcgattcgacgcttgcttgggcct
ctaggttctcaaaggaaaaaaattgaacaagaaacaggtgcacgaattgctgtgagtgat
gggacaattactatagttgcgaaaaatcagtcagttatggaaaaagccaaagaaaaggtt
gattttcttatcggacgtgaaattgaagttggtggaatttacaaaggtgtcatttcatca
attaaagaatatggcgcttttgtggaattcaatggtggtcaacaaggtcttcttcacatc
tctgaactgtcgcatgaaccggtatctagagtctcagaagttgtaactgtgggccaggag
ctatcattaatgtgcattgggcaggatgtgagaggtaatattaaactgtctctgaaggcc
atgcttcctcgggctggatctgaaaagaagaatttggagagtcaagattctgttgctcca
aaacaagaagttaatgtttgggcctctgtggagaatgtgcctacctgccaagtagatgaa
gaaagcgaagttgagcctgcaacaaattccacaccagcagtagtaatccggagtgctgca
gaatgtgatgcgcaggatattgctgctggtcaacattccatcaagaagtctggaaagggt
gcaaaaacttcacctaggccttataatgcttcatcaagacatcgggatgatttcagatca
acccccactaatagaaagcgtgcaccgaatcagacacaaatgaagaaggagaatgaacta
aaagattactgtggaagcaagccagaaactgacagtagacctggaaacttgttgcatgta
ctgatgcagaatgatgcagatgagaagcctaaatcttttggttctaccagtgttcgcgca
ggttccctgaagctgggagaccgagtaacagcaaagatataccagatacgcgcacatggg
ctggtacttgaattgggtggtggagtacgaggaatgtataaatttgaggtaaatggcaga
agggattttgaggtaggtaaggagctccctgtgcagtgttccagcttctcgagcaaggga
attccagtattttcgttattggaagatgagtag
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