Phoenix dactylifera (date palm): 103711590
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Entry
103711590 CDS
T03274
Name
(RefSeq) probable pectate lyase 5
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00040
Pentose and glucuronate interconversions
pda01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103711590
Enzymes [BR:
pda01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103711590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
VWC2L_C
Motif
Other DBs
NCBI-GeneID:
103711590
NCBI-ProteinID:
XP_008796023
UniProt:
A0A8B7CC57
A0A8B9B1T9
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MTTLPFILLFLSSLLTIPSSSSPTPTPSAAVQDPELVVQEVQRSLNSSRRRLGYLSCGTG
NPIDDCWRCDRNWESNRQRLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPVNPKPGTLRY
AVIQDEPLWIIFQQDMVIKLKEELIMNSYKTLDGRGASVHIAGGPCITIQYVNHIIIHGL
HIHDCKPGGNAYVRDSPEHYGWRTVSDGDGVSIFGGSHVWVDHCTLSSCHDGLVDAIHGS
TAITISNNYMSHHDKVMLLGHSDGFTNDKNMQATIAFNHFGEGLIQRMPRCRLGYFHVVN
NDYTHWEMYAIGGSAAPTINSQGNRFLAPDTRFSKEVTKREDASEGEWKNWNWRSEGDLM
LNGAFFTPSGAGASSSYAKASSLGARPSSLVSSITMSAGALLCKKGSHC
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgaccactctaccattcattctcctcttcctttcctcactcctcacaatccccagttcc
tcctcccccacgcccacaccatcagcagcagttcaagatccagagttagtagtccaagaa
gtgcagaggagcttaaacagttctcggcggcggctgggctacctgtcgtgcggcaccggc
aacccgatcgacgactgctggcggtgcgaccggaattgggagagcaaccggcagcgcctc
gcggactgcgccatcgggttcggcaagaacgctatcggcggacgcgacggcaaaatttac
gtcgtgaccgacagcggcgacgacgaccccgtcaacccgaagcccggaactttgcgctac
gccgtcatccaggacgagcccctctggatcatcttccagcaagacatggttatcaagctc
aaggaggagctaatcatgaactcctacaagaccctcgacggccgcggcgccagcgtgcac
atcgccggcggcccctgcatcacgatccagtacgtgaaccacatcatcatccacggcctc
cacatccacgactgcaagcccggggggaatgcctacgtgcgggactcgccggagcactac
gggtggcgcacggtgtcggacggcgacggtgtgtcgatcttcggagggagccatgtatgg
gtcgaccactgcacgctgtcgagctgccacgacgggctcgtcgacgcaattcatggctcc
acggcgatcacgatatcgaacaactacatgagtcaccatgacaaggtgatgctcttgggg
catagtgatggcttcacgaatgacaagaacatgcaggccaccattgccttcaaccacttc
ggggaagggctcattcagaggatgccgaggtgtcggcttgggtatttccatgtggtgaat
aacgactacacgcactgggaaatgtacgccattggagggagcgcggcccccaccataaac
agccaagggaataggttcttagcaccagacacccggttctccaaagaggtgaccaagcgc
gaggatgcttcagagggcgagtggaagaactggaactggagatcggaaggggacctgatg
ttaaatggggccttcttcacaccctccggcgccggggcctcatcgagctatgccaaggcc
tcgagcttgggggcgaggccatcctctctggtgagctcgatcaccatgtcggctggtgca
ctcctctgcaagaagggctcgcattgttga
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