Phoenix dactylifera (date palm): 103711660
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Entry
103711660 CDS
T03274
Name
(RefSeq) DNA mismatch repair protein MSH4 isoform X2
KO
K08740
DNA mismatch repair protein MSH4
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103711660
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Meiosis-specific proteins
Others
103711660
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
AAA_27
Motif
Other DBs
NCBI-GeneID:
103711660
NCBI-ProteinID:
XP_008796122
UniProt:
A0A8B7CC72
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Position
5:complement(3951714..3984307)
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AA seq
796 aa
AA seq
DB search
MEDVGGGGDRSSFVIGLIENRAKEVGVAAFDLRSASLHLSQYIETSCSYQNTRTLLHFYD
PVVIIVPPIKLAPDSMAGVSELVDKHYTSHKKITMSRGFFDDTKGAVLVKNLAAKEPSAL
GLDTYYKQYYLCLAAAAATIKWTEAEKGVIVTNHSLSVTFNGSFDHMNIDATSVQNLEII
DPLHSELCGTGNKKRSLFQMLKTTKTVGGTRLLRANLLQPLKDMETINARLDCLDELMSN
EELFFGLSQGLRKFPKETDKVLCHFCFKPKKITEEVLRPANGRKSQMLISDIIILKTALD
ALPFLSKVLKDAKSFLLCNIYRSVCENEKYAGIRKRIGDVIDEDVVHARAPFVACTQQCF
AIKAGIDGLLDVARRSFCDTSEAIHTLANMYREEFKLPNLKIPYNNRQGFYFSIPQKDIN
GKLPDKFIQVMKHGKNIHCSSFELASLNVRNKSAAAECFMRTELCLEGLVDVIREDVPIL
RLLAEVLCLLDMIVNSFAHTISSKPVDRYTRPEFTDDGPMAIDAGRHPILGGLHNDFVPN
NLFLSEASNMVIVMGPNMSGKSTYLQQVCLIVILAQIGCYIPARFASLRVVDRIFTRMGT
GDNIEHNSSTFMTEMKETAFLMQNVSPKSLIVMDELGRATSSSDGFAIAWSCCEHLLSLK
AYTIFATHMEDLSELATIYPNVKILHFEVDLRNDRLDFKFCLKDGPRHVSHYGLLLAGVA
GLPSSVIEAARNITARITEEEVKRMDINCEEHHSIQMVYRFAQKLICLKYSNQGEDYIRQ
ALQNLKESNKDGRLIC
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggaagacgtaggcggtggaggagatagatcgagtttcgtcatcggattgatcgagaac
agagcaaaagaggttggtgtggctgcttttgacttgagatccgcttcactgcatctttct
caatacattgaaacaagttgttcatatcaaaacacaagaaccctgctgcatttctacgat
cctgtggtcataattgttcccccaatcaaactggcaccagatagtatggcaggagtctcg
gaactggtagataaacattatacatcacacaaaaagattacaatgtcccgtggcttcttt
gatgatacaaagggggccgtgctggttaaaaatttggctgctaaggagccatctgctctt
ggtctggatacctattataagcaatattacctctgcctagctgctgctgctgctacaatc
aaatggactgaagcagagaaaggcgtaattgttacaaatcactcattgtcggttaccttc
aatggctcatttgaccacatgaatattgatgcaaccagtgtccaaaatttggaaattatt
gacccattgcattctgaactatgtggcaccggcaacaagaagagaagtctattccagatg
ttgaagacaacgaagactgttggagggactagactacttcgtgccaacttattgcaacct
ttgaaagacatggaaactatcaatgctcgtttggactgtttagatgagttaatgagcaat
gaggagctattttttggcctgtcacagggccttcgtaaatttccaaaagaaactgataag
gtactgtgtcacttctgctttaagcccaaaaaaatcacagaggaggttttgaggcctgcc
aatggtagaaaaagtcaaatgttgatatcagacattattattctcaaaactgctttagat
gccttaccttttctctcaaaggtacttaaggatgcaaaaagttttcttctttgcaacatt
tacaggagtgtttgtgaaaatgaaaaatatgcaggcataagaaagagaattggtgatgtg
attgatgaagatgtagtgcatgcaagggctccttttgttgcctgcacacaacaatgtttt
gctattaaggctggaattgatggacttctggatgttgcacgacgctctttctgtgatacg
agtgaagctatacatactcttgcaaacatgtaccgggaggaatttaagctgccaaatttg
aagattccctataacaataggcaaggattttacttcagtattccacaaaaggacataaat
ggaaagcttcctgacaaatttattcaggtcatgaaacatgggaagaacatacactgctca
agttttgaacttgcatctctaaatgtgagaaataagtcagctgctgctgaatgttttatg
cggacggagctttgcttggaagggctagttgatgtcataagggaggatgtccccatacta
agactgcttgcagaggtcttatgccttctagacatgattgtgaattcatttgcacataca
atatccagtaagccagttgatcgctatacaagaccagagttcactgatgatggtcctatg
gcaattgatgctggaaggcaccctattctaggaggcttacacaatgattttgttcctaac
aatctttttctttctgaagcatctaatatggtgattgtaatgggcccaaacatgagtggg
aaaagcacttatcttcaacaagtttgtctgatagttattcttgcacaaatcggttgttac
attcctgctcgttttgcatctctaagggtggttgatcgcatatttacacggatggggact
ggcgacaacattgaacacaactcaagcacctttatgaccgaaatgaaagagacagctttc
ctcatgcaaaacgtttctcccaagagcctgatagttatggatgaacttggaagggctact
tcatcctctgatggatttgcaattgcatggagctgttgtgaacatttgttgtctctgaag
gcctacactatatttgctacacatatggaagacctgtctgaactggcaaccatttatcca
aatgtgaagattctccattttgaagttgacttgaggaatgaccgcctagatttcaagttt
tgtctcaaagatgggccacgacatgtgtcgcactatggtcttttattggctggagttgca
ggtctaccaagctctgtgattgaggcggcaaggaatatcactgcaaggatcacagaagag
gaagtgaagaggatggacatcaactgtgaggaacaccattccattcaaatggtatacagg
tttgcacaaaaactaatttgcttgaagtattcaaaccaaggagaggattatattcggcaa
gctctacagaatctcaaggagagcaacaaagatggcaggttaatatgttga
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