Phoenix dactylifera (date palm): 103711997
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Entry
103711997 CDS
T03274
Name
(RefSeq) SWI/SNF complex subunit SWI3A
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103711997
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pda03021
]
103711997
03036 Chromosome and associated proteins [BR:
pda03036
]
103711997
Transcription machinery [BR:
pda03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103711997
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103711997
PBAF complex
103711997
GBAF(ncBAF) complex
103711997
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103711997
NCBI-ProteinID:
XP_008796581
UniProt:
A0A8B7CCZ3
LinkDB
All DBs
Position
10:7554434..7567491
Genome browser
AA seq
549 aa
AA seq
DB search
MTSSSEDDFGRDLYSIPSSSNWFQWDEIHGTERRELPDFFDGSAASRNVRVYKEYRDFII
NKFREDPSRRLTFTEVRKSLIGDVGTLRKVFLFLERWGLINFGVSDGRPRPTEEVGPRVV
VEEPGAGVQVMPASSKLASGRSVAAATAAGAGETGFRLPPLSSYSDVFGDWAPGKGPVCA
VCGDQCVSGRHEPLMEGGFVVCLKCSKTENEIEGKSADDNSDRVDGNANHATGAWTDAET
LLLLEAVLKHGDDWDLIAQHVRTKNRLDCIARLIQLPFGDHMLGTFSGKYDAKNSGNQAT
NTKAIQHASSELLPEPKTDGHVHNDVNEKVEEESIPVHPSKRRHIQAIANATDSLMKQVA
LLSTVAGPHVAATAAEAAVTALSDENPWAGEVFNIDEDEARKKRKSFPTNNEPKSDVKVE
DQDVEMHKQTDTPVLSEKNFSATAFQTKAAIATALGAAAARAKLLADQEGREMELLVASI
IEAQMRKIQYKIKHFKELEFIMEKEYTLIQQMKESLLDKWVEVIQQIFQAGIPRWKDNVF
PKSLWNHGS
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgagctccgaagacgacttcggccgcgatctctactccatccccagctcttcc
aactggttccaatgggacgagatccacgggacggagcggcgggagctgccggatttcttc
gacgggagcgccgcgtcccggaacgttagggtctacaaggagtaccgcgacttcatcatc
aacaagttccgggaggacccctcccgtcggttgaccttcacagaggtgcggaagtcgctg
atcggagacgttggaaccctccgcaaggtgttcctgttcttggagagatgggggttgatc
aatttcggggtatcagatgggcggccgcggccgacggaggaggtggggccgcgggttgtg
gtggaggagccaggggctggcgtgcaggtgatgccggcgtcctcgaaattggcttcgggg
cggtcagtagcggcggcgacggctgctggggctggggagactgggtttaggttgccgccg
ctgtcgtcgtactcagacgtgttcggggactgggcgccggggaagggcccggtttgcgcg
gtctgtggggaccagtgtgtctctggtcgacatgaaccgctgatggagggtggttttgta
gtatgtttgaaatgttccaaaactgagaatgagattgaaggaaaatcagcagatgacaat
agtgatcgtgttgatggcaatgctaaccatgcaactggtgcatggacagatgcagagacc
ttacttcttttagaagctgttctaaagcatggagatgattgggatcttattgcccagcat
gtgcgaacaaagaacagacttgattgtattgcaaggcttatacagctaccttttggtgac
catatgttgggcaccttcagtggtaaatatgatgctaaaaactcaggcaaccaagcaacc
aatactaaagcaatccagcatgcttctagtgagctactgccagagcctaagacagatggt
catgtgcataacgatgtgaacgagaaggttgaagaagaatctattccagtacatccttca
aagcgaagacacattcaagctattgcaaatgctacagattctttgatgaaacaggtagct
cttttgtctacagtagctggcccgcatgttgctgccacagcagcagaggcagctgttaca
gcattgtccgatgagaacccatgggcaggcgaggtcttcaatattgatgaagatgaagct
agaaaaaagcgtaaatcattcccaactaataatgagcccaagagtgatgtcaaggttgag
gatcaggatgtggagatgcataaacaaacagatactccagtactgtcagagaagaatttt
agtgctacagcatttcaaactaaagctgccattgcgacagctcttggggcagcagctgct
cgtgccaagctactagcagaccaagaagggagggaaatggaacttttggtggcatcaatt
attgaagcgcagatgagaaagattcaatataaaatcaagcatttcaaggagctggagttc
attatggagaaggaatacaccctaatacagcagatgaaggaatctcttctcgacaagtgg
gtagaggtcattcagcagatatttcaggctgggattccaagatggaaggacaatgttttt
cccaaatctttgtggaaccatggttcctaa
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