Phoenix dactylifera (date palm): 103712035
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Entry
103712035 CDS
T03274
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103712035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pda03041
]
103712035
Spliceosome [BR:
pda03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
103712035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
103712035
NCBI-ProteinID:
XP_008796632
UniProt:
A0A8B7CCY8
LinkDB
All DBs
Position
Unknown
AA seq
970 aa
AA seq
DB search
MDKDRSSRKSRDDREKDGDSVKDHHRRDRDRDRDHKHRHHHPEVKRHGSRDERHRDDDRR
RRSRDDSPSDLEPRREEKRHGSRDERHRDDDRRHGGREDSPADLERRRERSTSRARDSVE
RGRVSLEQSVERRHHSSSSRKRKEHEGDEEEWDKNGKRVRVSDGVREEKRERRRFEDRAV
EDSSDLNGVSKEERKEERVSKDRRKEGGLRAMEKDREDNRMKEEVMGDAEIKKPRKEGRR
FSDSVEAGEKKDEDEPKAVDNKEVREEWRSKDRVKEENLGTVDEAKTSVSSVNSKDESGN
TQVVNGDQSRMAMEKSGSRPNVIAQEPLTVASKVSISSAASYPFPTKVSSITTTNENEGV
SIRSDEVPGKSSTDGTATSVAGKSGSLSLDALAKAKKALQMQKELAEKLKKLPTLNKVAG
TSTENSKVVYNKDGPNIPPSGLGAPAGSSTSASAKPVQAMPRLPVGVTPSEKPSAAGGIG
ILPGLTTIPNIEAVKRAQELAAQMGFRQDPAFAPLINMFPGPSSTDVAAPQRPAKAPVLL
LDAQGREIDEHGNVINMPKLTNLSTLKVNINKQKKEAFQIIKPDLDAIAESNPYFDDRMG
INKAKLLRPKRMTFQFVEEGKWSKQAEMIKFKSQFGEAQAKELKMKQSQLAKAKAEPDSN
PNLIAVGVRVTKEKKKEEIPEIEWWDKPILRSGIYGDVANEKLNMDKITIYIEHPLPIEP
PAVPAPPPPQPLKLTKKEQKKLRTQRRLAKEKDRQEMIRQGLLEPPKPKIKMSNLMKVLT
SEATQDPTKLEMEIRSAAAEREQAHVDRNIARKLTPAERREKKERKLFDDPNTLETLVSV
YKIKDLSHPQTRFKVDVNAQENRLTGCAVMSDGISVVVVEGGRKPIKRYGKLMLKRINWA
AAVSNEENAEDSDAPTNSCVLVWQGSVAKPSFHRFLVHQCRSEVAARKVFADAGVPHYWD
LAVNYSEELL
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggacaaggatcgatccagccggaaatcccgagacgatcgcgagaaggatggagattcc
gtcaaggatcaccaccgccgtgaccgcgaccgcgaccgggatcacaagcaccggcaccac
caccccgaggtgaagcgccacggatcgagggacgagcggcaccgcgacgatgaccgccgc
cgccgctcccgggacgactcgccttctgatcttgagccgaggagggaggagaagcgccac
ggttcccgggacgagcggcaccgcgacgatgaccgccgccacggaggccgtgaagactcc
ccagccgatcttgagcggagacgcgagcggtcgacgagtagggctagggattctgtcgag
cggggtagggtttccctcgagcagtccgtggagcggcgccaccactcgtcttcctcgcgg
aaaaggaaggagcacgaaggagatgaggaggagtgggacaagaacggcaagcgggtcagg
gtttctgatggggtgagagaggagaagagggagagacggcgttttgaggaccgggcggta
gaggattcgagcgatctgaatggggtttccaaagaagagaggaaagaagagagggtttcg
aaggatagacggaaggaaggagggttgagggctatggaaaaggatagggaggacaacagg
atgaaggaagaagtcatgggcgacgcagaaatcaagaaaccgcggaaagaagggaggagg
tttagtgatagtgtcgaggcaggggagaagaaagatgaagatgaacctaaagcagttgat
aataaagaagtgagagaggagtggagatctaaggatagggttaaggaagaaaatttgggg
actgtggatgaggcaaaaacgtcagtttcatccgttaattcaaaagatgagtcgggcaac
acgcaagtggttaatggtgatcagagcaggatggcgatggagaagagcggttccagacct
aacgtcattgctcaggaaccgcttactgtggcatcaaaggtttctattagctctgccgct
tcttatccctttcctaccaaggtatcttcaattactaccaccaatgaaaatgagggagtt
agtattagatctgatgaggttcctggaaaatccagtacagatgggacagcaacttcagtc
gctggcaaaagtggcagcctatctcttgatgctttagcgaaagctaaaaaggctttacaa
atgcagaaggaactagcggaaaagctgaagaagcttcctacgctaaataaagttgctggt
acaagcactgagaactccaaggtagtatataacaaggatgggcctaacattcctccatca
ggtttaggagcaccagctggttcttcgacttctgcctctgcaaaaccagttcaggcaatg
ccaagattacctgtcggggtaacaccatctgaaaagccatctgctgcaggtggcatcggc
attcttcctgggctcacaacaatacctaatattgaagctgtaaagcgagcacaagagctt
gctgctcagatgggatttcgccaggatccagcctttgcacctctcataaatatgtttcct
ggaccgtcatcgactgatgtagctgcacctcagagacctgccaaggctcctgttctgctc
ttagatgctcagggtagagaaattgatgagcatggaaatgtcattaatatgcccaagttg
acaaatctcagtactctgaaggtcaacatcaacaaacagaagaaagaagcatttcaaatt
atcaaaccagatttagatgctattgcagaatcaaatccttattttgatgataggatgggt
attaataaagcaaagctcttgaggcccaaaaggatgacatttcagtttgtagaggaaggc
aaatggtcaaagcaagcagagatgataaaatttaagagtcaatttggagaagcacaagca
aaagaattgaagatgaagcagtcacagcttgcaaaggcaaaagctgagcccgacagtaac
ccaaatttgatagcagtaggggtgagagttactaaagagaagaagaaggaagagatccct
gaaatagagtggtgggacaagccaattttacgatcaggtatctatggtgatgtcgccaat
gagaaactaaacatggacaagatcacaatatatatagagcacccacttccaattgagccc
ccagcagtgcctgccccaccaccgccacagcctctgaagcttacgaagaaggagcagaag
aaattaaggacgcagaggcgccttgcgaaggaaaaagacaggcaagaaatgatcaggcag
ggcctgctagagcctcccaagcccaagatcaagatgagcaatctcatgaaagtcctcaca
tccgaagcaactcaagacccaacaaagcttgaaatggaaattcgtagtgctgctgctgag
cgtgaacaagctcatgtcgatagaaacattgctcggaagctcacccctgcagaacgtcgt
gagaaaaaagagaggaagctctttgatgatccaaacacacttgagacccttgtttctgta
tacaagattaaagacctttcgcacccacaaacacgcttcaaagttgatgtgaatgcccaa
gagaaccgattgacaggatgtgctgtgatgtcagatggcatcagtgttgtggttgtggaa
gggggtagaaaaccaattaaaagatatggcaagctgatgctgaaacggataaactgggct
gctgctgttagcaatgaggaaaatgctgaggactcagatgcccctaccaacagttgtgtt
ttagtgtggcagggtagcgttgcaaaacctagcttccataggtttcttgttcaccagtgc
agaagcgaggttgctgccaggaaggtgtttgcagatgctggggttccacactattgggat
ctggctgtcaattactctgaagaactgttgtaa
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