Phoenix dactylifera (date palm): 103712067
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Entry
103712067 CDS
T03274
Name
(RefSeq) small RNA degrading nuclease 1-like isoform X2
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103712067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103712067
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
Pre-60S particles
RNases
103712067
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
DUF5006
Motif
Other DBs
NCBI-GeneID:
103712067
NCBI-ProteinID:
XP_008796688
UniProt:
A0A8B7CD84
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MDEVISNADGEVLAEIVKFTQKQGLKGGKGGWKDFLHSHDRRFGAGVSDPARRTKEILVA
FLQTFEEKHLKFFDKMIRRLADCKAIKKFITDFPVQETPLQRLVRLTMEHSLFSRCYSFP
SHEEEWIIIPLGKVSEAMKSKVMLSIDCEMVLCEDGTEAIVKVCAVDHNLEVKLDELVNP
NKAVADYRTDITGIYAEDLEGVTCSLPDIQKSFKKLLSRGTILVGHGVHNDLRVLKIDHP
RIIDTSYIFKCGDLPTVTPSLNNLCKSVLGSPVRQKGEPHDCLNDAKAAMKLVLAKLEYG
FDDPISVLNNNLSVSDQAKLLLHNIPVDVPYQDLLRLFPEKYNVDIENDLKVRGPSYATF
AVFKDAREAYEAFKGIEAPERRDSSGRPQKNVFLETRSGKSISLHVRRMTAAAPLDGHDP
LNKRWHKMEMVTQRRQHAKDETNDSKKPRTSLHYCEHVKEIEKLKEELCQREDEIFELQK
MIAALARKNGL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagtgatttcgaatgcagacggggaggttcttgccgagatcgtgaagttcacc
caaaaacaaggattgaaaggtggcaaaggaggatggaaagattttttgcatagtcatgat
aggagatttggtgctggtgtaagtgatccggcaagaagaactaaagagatattggttgct
tttctgcaaacgttcgaggaaaaacatctgaagttttttgacaaaatgataagacgtctt
gctgactgcaaagcaataaagaagttcatcaccgactttccagtccaagagacccctctg
cagaggctggtccgtttgacgatggaacattcacttttctcacgatgttactcttttcca
tcccatgaggaggagtggataatcattccactaggtaaagtttctgaggcaatgaaatca
aaagttatgctttcaattgattgtgagatggtcctttgcgaggatggtactgaagcaatt
gtaaaagtatgtgcagtagatcacaatttggaggttaaacttgatgaacttgtaaatccc
aacaaagctgttgctgactacagaacagacatcactggaatatatgctgaagatttggag
ggagttacttgttcattgcctgatatacagaaatcctttaagaagcttttgtctcgaggg
actattttagttggccacggtgtacataatgatttacgagtactaaaaattgatcatcca
cgaattattgacacatcatacatcttcaaatgtggagacttgcctactgttacaccttcc
ttgaacaatttgtgtaagtctgtgttgggttctccagtacgacaaaaaggtgaaccacat
gactgcttaaacgatgcaaaggctgcaatgaagctggttcttgctaagcttgaatatgga
tttgatgatcccatttctgttctaaacaacaatttgtctgtctctgatcaagcgaagtta
cttcttcacaacataccagttgatgttccttatcaagacctgctgagactatttcctgag
aaatataatgttgatatcgagaatgatctaaaggtccgaggccctagctatgctacattt
gctgttttcaaggatgccagagaggcatatgaagcattcaaaggaatagaagccccagaa
agaagggactccagtggtcggcctcagaagaacgtcttcttagaaactagaagtgggaaa
agcatcagcttacatgttcgaaggatgaccgctgctgctccactcgatggacatgatcca
ttaaataagagatggcacaagatggaaatggtgacccaaagaaggcagcacgcaaaagat
gagaccaatgattcaaaaaagccacggacatctttgcattactgtgagcatgttaaagag
attgagaaattgaaagaggagctctgtcagagagaggatgaaatattcgagttgcaaaag
atgatcgctgcccttgctaggaaaaatggattgtga
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