Phoenix dactylifera (date palm): 103712070
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Entry
103712070 CDS
T03274
Name
(RefSeq) squalene synthase 1-like isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda00100
Steroid biosynthesis
pda00909
Sesquiterpenoid and triterpenoid biosynthesis
pda01100
Metabolic pathways
pda01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
103712070
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
103712070
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pda01006
]
103712070
Enzymes [BR:
pda01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
103712070
Prenyltransferases [BR:
pda01006
]
Terpene biosynthesis
Squalene/phytoene synthase
103712070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HEPN_SAV2148
Motif
Other DBs
NCBI-GeneID:
103712070
NCBI-ProteinID:
XP_008796678
UniProt:
A0A8B7CD61
LinkDB
All DBs
Position
Unknown
AA seq
409 aa
AA seq
DB search
MGLLGAIVEHPEDLYALVKLKMASDRIKKQIPAEPHWGFSYTMLQKVSRSFALVIQQLGP
ELRNAVCIFYLVLRALDTVEDDTSIPSDIKVPILESFHHHIYERDWHFSCGAKDYKVLMD
KFHYVSTAFLELGASYQEAIEDITKRMGAGMAKFICKEVETINDYDEYCHYVAGLVGLGL
SKLFHASGLEELAPDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPREIWSKYASKL
EDLKYEENSTKAVQCLNDMVTNALMHAEDCLQYLFALKDLAIFQFCAIPQIMAIGTLALC
YNNVEVFRGVVKMRRGLTARVIDQTRSMSDVYGAFFEFSSLLKSKIDDNDPNASLTRHRV
EAIQKACISSGLLNKRGYHMYESRLQYNSVLVIMVLLLVSVLFAILSAK
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atggggttgttgggggcgatcgtggaacacccggaggatttgtacgcgttggtgaagctg
aagatggcgtcggatcggatcaagaaacagatcccggcggagccgcactggggcttctcc
tacaccatgctccagaaggtctctcggagcttcgccctcgtcatccagcagctcggcccc
gagctccgaaatgcggtttgcattttctatctggtcctcagagcccttgatactgttgag
gatgatactagcataccttctgacatcaaagtgccaattctggagtctttccatcatcac
atatatgaacgcgactggcatttctcatgtggagcaaaggactacaaagttctgatggat
aaatttcattatgtttcaactgctttcttagagcttggtgcaagttatcaggaggcaatt
gaagatattaccaagagaatgggtgcaggaatggcaaagtttatatgcaaggaggtagaa
acaatcaacgattatgatgagtactgtcattatgtagcaggactagttggattaggactg
tctaagctctttcatgcgtctgggttggaagaactagctccagattccctttccaattca
atgggcttatttcttcagaaaacaaatataatccgagattatttggaagatataaatgag
ataccaaaatcacgcatgttctggcctcgggaaatttggagtaaatatgccagtaaactt
gaggatttgaaatatgaggagaattccacaaaagctgtgcaatgcttaaatgacatggta
accaatgctttaatgcatgctgaagattgccttcagtacttgtttgctttgaaggatctt
gccatctttcaattttgtgctattccacagatcatggcaattggaacccttgctctatgc
tataataatgtggaggtttttagaggagttgtgaagatgcgacgtggacttactgctagg
gttattgaccaaacaagatcaatgtcagatgtctatggtgctttctttgaattttcatct
ttgctcaagtccaagatcgatgataatgatccaaatgccagtcttactcgtcatcgtgtg
gaagcaatacagaaggcttgcatatcctcaggattgctaaataaaaggggatatcacatg
tatgagagcaggctgcagtacaattcagtgctggtgatcatggtcctcctcttagtatct
gtcttatttgccattctatccgctaaatga
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