Phoenix dactylifera (date palm): 103712148
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Entry
103712148 CDS
T03274
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103712148
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pda04121
]
103712148
Enzymes [BR:
pda01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103712148
Ubiquitin system [BR:
pda04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103712148
Multi subunit type E3
ERAD complex
103712148
LMBR1L-GP78-UBAC2 complex
103712148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_5
E3_UbLigase_EDD
zf_RING_Vps8_fungal
zf-RING_Vps41
zf-C3HC4_4
U-box_ZFPL1
PHD
zf_RING_Vps8
RINGv
Motif
Other DBs
NCBI-GeneID:
103712148
NCBI-ProteinID:
XP_008796807
UniProt:
A0A8B7CD80
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All DBs
Position
5:4499469..4519129
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AA seq
583 aa
AA seq
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MAVNYLYASAISTVISLVGLQWWTVSLLDWMKSDGLVDENEVGSRSVEREMALLLGSRVT
IALLASSVLNVLVLVIVCLKTIFFVQLYPSETRKVLERLIHYLIYKGTFLPLVVPPNMFQ
VVLWSGWLVFLCCLKMFQSLARDRLEQLNASPAATPSKYFRVFSTFLLVLFADLLWIKLC
MMIYKSSGSSLFVLLFFEPLSIVFETSQAIIVHGFQLLEIWQRHSIDSGGDFLGSNTSYK
IVAGSLSEWKGILIRNCGFLLEMMAFLMAVGHYLIIWWLHGMAFHLVDAVLFLNLRALVS
AIVKRVRAYIKLRKALSSLNGALPDATYEELCAFDDECAICREPMARAKKLSCNHLFHLA
CLRSWLDQGLTEVYSCPTCRRPLFLSNTQDGTSSATGELSNVGQLAEQLNLGLNLRRISG
HTPPFGAFPNLQHNPSDTMWREVGFDSSWAPPWLNQGMDVAGSSSGIRSGGLNGVQMMMR
QLTSVSDNYAHGSLDDSPWILWPNQQASGSSVPPSSSLRYTRNTAGLQFRDTAPTVNGNM
PDILAMVDRVREVLPHMPDELIIQDLLRTNNINITVNNLLLAQ
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaattacttgtacgcctctgccatcagcacggtgatcagccttgttggtctg
caatggtggacggtgtcgcttcttgattggatgaaatctgatggtttggttgatgagaat
gaggttggctcgaggagcgtcgagcgggagatggcactgctcttgggctcgcgtgttacc
atcgctttgttggcgagttctgtgcttaatgtgctcgttcttgtcatcgtgtgcctcaag
accatattctttgtgcagttatatccttcagagactcgaaaagtattggaacgccttatt
cattatctaatttacaagggaacttttcttccactggtcgtaccacctaatatgtttcaa
gtggtcctgtggtcaggctggctggtctttctttgttgcctgaagatgttccaatcattg
gccagagatcggcttgagcagttaaatgcatcccccgctgcaacaccttcgaaatacttt
cgtgttttttcgacctttttgcttgttctatttgcagaccttctatggataaagctgtgt
atgatgatctacaaatcatccggttctagtttatttgttctcttgttcttcgagcctctc
agtattgtttttgagacatcacaggctatcatagtacatgggtttcagttgcttgagatt
tggcaacggcattccattgatagtggtggtgatttcttgggctccaatacttcttacaaa
atagtggcaggttctttatctgaatggaagggaattctcattcgaaattgtggttttctc
ctagagatgatggcttttttaatggcagttggtcattacttgatcatctggtggcttcat
ggcatggcatttcatctagtggatgcagtccttttcctaaacttgcgtgctcttgtaagt
gcaattgtgaagcgggtcagggcatatatcaagttaagaaaggcattaagttctctaaat
ggagctcttcctgatgctacatatgaagagctttgtgcattcgatgatgaatgtgctatc
tgcagagaaccaatggctagggcaaaaaagctatcatgcaatcacctttttcatcttgcg
tgcttgaggtcttggttagatcagggcttaactgaagtgtattcttgtcctacatgtcga
aggcctctttttctgtctaatactcaagatggcacaagctctgcgacaggagaactttcc
aatgttgggcaacttgctgagcagttaaatttgggattgaacctgcggagaatatctgga
catacaccaccttttggggcatttcctaacctgcaacacaatccttctgatacaatgtgg
agggaagttggttttgattccagttgggcacctccgtggctaaatcaaggaatggatgtt
gctggttcatccagtggaatcaggtcaggtgggcttaatggagtccagatgatgatgagg
cagctgacatctgtcagtgataactatgctcatggttcattagatgattctccttggatc
ttgtggcctaatcagcaagcttcaggttcctctgttcctccatcctcctccctcagatac
accagaaatacagctggcctgcagtttagagacactgcacccactgtaaatggaaacatg
ccggatatacttgccatggtagatagagtgcgagaagttttgccccacatgcctgatgaa
ctaattattcaggacttgttgcggaccaacaacatcaacattactgtgaataatcttctt
ctagctcaataa
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