Phoenix dactylifera (date palm): 103712185
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Entry
103712185 CDS
T03274
Name
(RefSeq) LOW QUALITY PROTEIN: autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103712185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103712185
03029 Mitochondrial biogenesis [BR:
pda03029
]
103712185
Membrane trafficking [BR:
pda04131
]
Autophagy
Autophagosome formation proteins
ULK complex
103712185
Atg1 complex
103712185
Mitochondrial biogenesis [BR:
pda03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
103712185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
103712185
NCBI-ProteinID:
XP_038982897
UniProt:
A0A8B9AB03
LinkDB
All DBs
Position
5:4802381..4810521
Genome browser
AA seq
416 aa
AA seq
DB search
MAESSRTEQIITQFYLKALHAVLGSRIPHLHGDPSSSAAGLRARKRDRWFNLALGDLPPA
LDHPHHSVMDPMIIDVILTPRAAPAAAAEVVIERWTAQCESPAAXSWNHTSDSSSCFLYR
RTYKKSILLLRSLYSFLRLLPAYRVFRMLCSSNQSYNYDLSYRVSSFAEAVLEGGREGLK
LHSFTPVETQFGQLVVSVQYRPTLSDFNLEVSSLLPRMIITDYVGSPAADPMRAFPSLPA
LLTVADSVTAGTWQQLSGSLRLRSETLPVSIPQPLTGKSQVHRSPNLSDPPRSFLPPPSP
RSTRTDLSSQNSPLESRSFRKSEGLRIGDIYSNLQLFTAQKVFMSLKDGRDDSGRFSSVL
SSGGSPRLGFSRSSSRLSIQDDLDDGDFSCPFAVDDVDTSDSQTRYFSILHSGLLW
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggccgaatccagccggaccgagcagatcatcacccaattctatctcaaggccctccac
gccgtcctcggctcccggatcccccacctccacggcgacccctcttcctccgccgccggc
ctccgcgcccgcaagcgcgaccgctggttcaacctcgcccttggcgacctgccccccgcc
ctcgaccatccccaccacagcgtcatggaccccatgatcatcgacgtcatcctcaccccc
cgcgccgcccccgccgccgctgccgaggtcgtcatcgagcgctggaccgcccagtgcgag
tccccggccgccnnctcttggaaccacacctctgacagctcctcctgttttctctatcga
aggacctacaagaaatcgatcctcctcctccgatccctgtattccttcctccgcctcctc
cccgcctaccgtgttttccgaatgctttgctcctccaaccagtcctataattacgatctc
agctatagagtgtcgtccttcgcggaagccgttctcgagggtggaagagagggattgaag
ctgcacagcttcaccccggtggagactcagttcggccaactcgtcgtgtcggtccagtac
cgcccgaccctctcggacttcaatctcgaggtctcgtccctgctgccgcggatgatcata
actgattacgtcggtagcccggctgcggatcccatgagagccttcccttctctccccgcc
cttctcactgtcgccgactccgtcaccgccggcacatggcagcagttatctggcagtctc
cgtctgcgctctgaaactttgccggtgagcataccacagccgcttaccgggaagagtcag
gtgcatcgcagtcctaatctttcggatccgccccgaagcttcttgccgccgccatctccg
aggagcacgaggacggatctttcgtctcagaattcacctttggagagtagatcttttaga
aaatcggaagggttaaggattggagatatctactcaaacttgcaattgtttacagctcag
aaggtttttatgagccttaaggatggtagggatgattctggaaggttctccagtgtgttg
tcttctggtggttcacctaggcttgggttttcaagaagctcaagcagattgtcgatccag
gatgatcttgatgatggtgacttctcttgtccttttgctgtggacgatgttgacacatca
gattctcagactaggtacttctccattcttcattctgggttattatggtga
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