Phoenix dactylifera (date palm): 103712242
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Entry
103712242 CDS
T03274
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103712242
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103712242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
103712242
NCBI-ProteinID:
XP_008796939
UniProt:
A0A8B8Z9P6
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All DBs
Position
17:complement(7998075..8015705)
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AA seq
1412 aa
AA seq
DB search
MASPPPFQMEDQTDEDFFDKLVDDEFIIDGSHSKATDMARDLSNLSLGDVGTSLEDSGDA
GFASEVEDRHENRTLESFEASKKDDLDADGSMASNSSDDKVAQSESSAEPAKEFGSQGSS
TMKSGLKGTTVKEVQWSAFGVNSQQFDNGGFEPYLGFLTESADGSANKLKSDADLNTSFI
GNTVENLNAYVGSSEQQDTQFYGSSDEQITGTNDAQHWESLYPGWKYDLSTGQWYQVDGY
DPSMTRQIDSYNTANEAQESFEDNGPAVVDGSISERSDVSYLQQSAQSVLETIAEDGTLS
GVSNWNQVSQVTTEYPSNMVFDPQYPGWYYDTNTQQWYALETYAQTTQMASSTVQDEVSQ
DVHSSAGFSEQNQNLYDEVGQSGQYPVESQVSQDFGGDWNSSTSNYMQRNMWLPEPTPNS
KQVGGFPGNQQLGSFYSSTGHAGSQTSQQTGFKTFEPIINHNDGRSNSMARSQSFVPAES
TYQFNQPKVEQSLQSHLSNSYYGNQNSLGYSQQPFQGANASYSQFSYTPHEERSSAGRPA
HALVTFGFGGKLIIMKDDNSFGTKLDYGSQGTAAGTVSVLNLIEVIMDRTDASSTINGGA
FDYFHALCQQSFPGPLVGGNAATKDINKWIDERIASCESPGMDFQKGELLRLLLSLLKIS
CQHYGKLRSPFGSDPSLEETDGPEMAVTKLFASAKRNSVRLREHGSFVHCMQNLPSEGQI
QATAVEVQNLLVSGRRKEALQCAQEGHLWGPALVLAAQLGEKFYVDTVKRMAHHQFISGS
PLRTLCLLIAGQPADVFSAGSSSSSLYAAANLYQQLAETQASGMLDDWEENLAIITANRT
KDDELVIIHLGDCLWKERGEVTAAHTCYLVAEANFESYSDSARLCLIGSDHWKCPRTYAS
PEAIQRTELYEYSKVLGNSQFILLPFQPYKLIYAYMLADMGKVPDSLRYCQASLKLLKNS
GRTPEVEMWKLLFSSLEERLKTHQQGGYSTNLAPGKLVGKFITSLDRSLHRMMGAPQVPL
PPMPQGSVNDNEIYSGAPKVANSQSTMVMSSLIPSASVEAMSEWTSDSGRKSMHNRSISE
PDFGRSPKQNSSKDAGSDGRQSKASVPEGSRFGRIGSTLLQKTVGWVSRSHRQAKLGEQN
KFYYDQKLKRWVEEGAEPPAEEAALPPPPTAASFQNGMPDYNIKNTFKSSENLAANGGSE
VKSSVPTERSSGIPPIPPSQNQFSARSRMGVRSRYVDTFNKAGGALTNSFQSPSAPSLKP
AAGAKFFIPTAPATTDEPKTETITESQETTIHEEPSSSVVNEASFSSPPSSSSSSSMQRF
PSMDHITPGKKGSGAAFQSGNGPLSRTRAASWSGSYTDAFNPKVAQTKPAGDGQIVPPFF
MPNNTSHTRSSSSSSVQLNVGSLGDDLHEVEL
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atggcatctcctcctccgttccagatggaggaccagacggacgaggatttcttcgataag
ctcgtggatgatgaatttattatcgatggatctcattctaaggctactgatatggcaagg
gatttgtctaatctcagcctaggtgacgtcggtacctcgttggaggattcgggggatgct
gggttcgcatctgaagtggaagaccggcacgaaaacaggaccttagagtcttttgaggct
tccaaaaaggatgatttggatgcagatgggagcatggcttccaattcttccgacgataag
gttgcccaatcggaaagttctgcagaacctgcaaaagaattcggttcgcaaggttcatca
acaatgaagagtggattgaagggaaccactgtgaaggaggtgcaatggagtgctttcggt
gtcaactcgcaacaatttgacaatggtgggtttgagccctatttgggcttcttaacggag
agtgctgatgggtctgctaacaagctgaaatctgatgctgacctgaatactagtttcata
ggaaacacagttgaaaatctaaatgcttatgttggttcctctgaacaacaagatacccaa
ttctatggctcaagtgacgagcagattactggtacaaatgatgcacagcattgggagagc
ctttacccaggctggaagtatgacctgagtaccgggcagtggtatcaagtggatggttat
gacccaagcatgaccagacaaattgacagctacaacacggcgaatgaagcccaagagagc
tttgaagacaatggtccggctgttgttgatggctctatttcagagagatccgatgtttct
tatctgcagcaaagtgctcagtcagtgttggagaccatagcagaagatggtacattgagt
ggtgtttccaactggaatcaagtttctcaggtaactacagaatatccatcgaatatggta
tttgatcctcaatacccaggatggtattatgacacaaacacccagcagtggtatgctctt
gagacatatgctcagactacacagatggcgtcaagtacagttcaggatgaggtgagtcaa
gatgtccactcttcagctggtttctcagaacagaaccaaaatttatatgatgaagttggc
caatctggacaatacccggttgagagccaggttagccaagattttggaggagattggaat
tcttccacaagcaactacatgcaacggaatatgtggctgcctgaaccaactcctaatagt
aaacaagttggaggtttccctggaaatcagcagttggggagcttttacagctcaacagga
catgcaggaagtcaaacaagtcaacaaacaggtttcaaaacctttgagcccattataaat
cataatgatggcagaagtaacagcatggccaggtctcagagcttcgttcctgctgaaagc
acataccagtttaatcaaccgaaagtggagcagagcctgcagtcacatttatctaacagt
tactatggcaatcagaactcgttaggctattctcagcaaccatttcagggtgccaatgca
tcttattctcagttctcttacactcctcacgaagagagatcatcagccgggcgtcctgct
catgcattggtcacttttggatttggtggaaaactcataatcatgaaagatgacaactct
tttggcacaaaattggattatggaagccagggcactgcagctggaacagtctcagttctg
aacttaatagaagttatcatggatagaactgatgcgtccagcaccattaatggtggagcc
tttgattacttccatgctttatgccaacaatctttccccggaccacttgttggtgggaat
gctgcaacaaaggatatcaacaaatggattgatgagaggattgctagctgcgaatctcct
ggcatggacttccagaaaggagaacttctgagattacttctttcattgctgaaaatatcg
tgtcagcattatggaaaacttcgatctccttttggatctgatccttcactagaggaaact
gatggtccagaaatggcagtaactaagcttttcgcatccgctaaaaggaatagtgttcgg
ctgagagagcatggatccttcgtacattgtatgcaaaatcttccttctgagggacagatc
caggcaactgcagtcgaggtacaaaaccttcttgtttctggtagaaggaaagaggccctc
cagtgtgcacaagaaggtcatttgtggggccctgcccttgtacttgcagcacagcttggt
gagaagttttatgttgacactgttaagagaatggcacatcatcagtttatatctggatcg
cctttacgtacactatgcctacttattgctggacaacctgcagatgttttctctgcagga
agctcctccagtagtttgtatgcggcagcaaatttatatcaacaacttgctgagactcag
gccagtggcatgttggatgactgggaagagaatctggccataataactgcaaataggaca
aaggatgatgaactggtaataattcatcttggagattgcctgtggaaggagagaggagag
gtaactgctgcgcatacctgctacttggttgcagaggcgaacttcgagtcatattctgac
agtgcaagactgtgtcttattggttctgaccactggaaatgccctcgaacttatgccagt
ccagaagctattcagagaacagaattatatgaatactcaaaggtgcttggaaactcacag
tttatcctactaccttttcaaccatacaagttaatctatgcctacatgctggccgacatg
ggaaaggttcctgattcattaaggtattgtcaggcatcattaaagttgctgaaaaattct
ggccgtactcctgaggtggaaatgtggaaattgctgttttcatccctggaggagcggttg
aaaacccaccagcagggtggatacagcacaaacttggccccaggaaaacttgtaggtaaa
tttattacctctcttgatagatcccttcaccgcatgatgggtgcaccacaagtacctctg
ccaccaatgccacaaggcagcgtgaatgataatgaaatctactctggggccccaaaagtg
gcaaatagccaatcaacaatggtcatgtcatctttaattccatcagcttcggtggaggcc
atgagtgagtggacaagtgatagtggtaggaagagtatgcacaacagaagcatttctgag
ccagattttggtagaagtcctaagcagaactcatcaaaggatgcaggctcagatggtcgt
caaagcaaagcgtcagtaccagagggatcacgttttgggcgcattggctcaactcttctt
cagaaaactgtgggttgggtttcaagatcccaccgccaggcaaaactgggtgaacaaaac
aagttctattatgatcaaaagcttaagagatgggttgaggaaggtgctgagcctccagct
gaggaagctgccctaccaccacctccaacagcagcatcattccagaatggtatgccagat
tacaacataaagaacaccttcaaaagcagtgaaaatcttgctgctaatggtggttcagag
gtgaaatcctcagttcccacagaacgtagttcggggatcccacccattccccccagccaa
aaccaattctcagctcgtagtagaatgggagttcgatcgaggtacgttgatacgttcaat
aaggctggtggagctttgacaaactcattccagtcaccttcagctccatctctaaagcca
gcggctggtgccaagtttttcatccctacggcacctgcaacaactgacgagccaaaaact
gaaacaataacagaaagccaagaaaccaccattcatgaagaaccatcttcatcagttgta
aatgaagcatcattttcttcgccgccgtcgtcgtcatcatcatcatccatgcaacgattt
ccaagcatggaccatattactcctggaaagaagggttctggggcagcattccaaagtggc
aatggccccttatcacggactcgtgcagcatcatggagtggatcttacacggatgcattc
aatcctaaagtggctcaaactaagcccgcaggtgatggacagattgtgccaccattcttc
atgcccaacaacacttcacatactcgttcaagcagcagctcgtctgtacagcttaatgtt
ggatctctgggggatgatcttcatgaggtggaactttga
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