Phoenix dactylifera (date palm): 103712495
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Entry
103712495 CDS
T03274
Name
(RefSeq) protein transport protein SEC23
KO
K14006
protein transport protein SEC23
Organism
pda
Phoenix dactylifera (date palm)
Pathway
pda04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103712495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pda04131
]
103712495
Membrane trafficking [BR:
pda04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
103712495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
103712495
NCBI-ProteinID:
XP_008797246
UniProt:
A0A8B7CDZ5
LinkDB
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Position
15:5387666..5415415
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AA seq
763 aa
AA seq
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MSEFLDLESQDGVRMTWNIFPGTKQDAVGCVIPTAAIYTPLKPIPNTPVLPYAPLRCRMC
RSILNPFSIVDYIAKIWICPFCFQRNHFPPHYSSISEDNLPAELFPQYTTIEYESTPDAG
PAVPPVFLFVVDTCMIEEEIGFLKSSLAQAVELLPEKSLVGLITFGTYVQVHELGFGQVP
KSYVFKGSKEVTKEQILEQMCFFTRKPKPSVGVIAGSRDGLSAESIARFLLPASECEFVL
DSLLEELQKDPWPVPSDQRASRCTSTALSIAASLLGVCVPGSGARIMAFVGGPSTEGPGS
IVSKNLSEPIRSHKDLEKGSAPLYNKAVKFYEGLSKQLVHQGHVLDLFACALDQVGVAEL
KVAVERSGGIVVLTESFGHSVFKDSLRHIFQSSDYDLGLSFNGIFEVNCSKDVKVQGILG
PCASLEKKGPLCSETAVGQGNTSAWKLCGLDKKTSLCLVFDIARKDGPEAIGQPTSNQFY
FQFLTYYQHNDGHMRLRTTTLSRRWVAGPGSIQDLIAGFDQEAAAAVMARLVSFKMEMEA
DFDPIRWLDRSLIRLCSKFGDYQKDSPSSFSLSPRLSIFPQFMFHLRRSQFVQVFNNSPD
ETAYYRMILNRENVANSVVMIQPSLISYSFQSDPEPALLDVTAIAADRILLLDSYFIVVV
FHGASIAQWRNAGYQNQAEHQPFAQLLQAPRDDADAIAKERFPVPRLVICDQYGSQARFL
LAKLNPSVTYNSDNPPAPGGDVIFTDDVSFQVFLDHLQRLAVQ
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaatttcttgacctggagtcacaggatggggtgcgaatgacttggaacatcttc
ccaggcacaaagcaggatgctgtgggctgtgtcatccctactgcagctatctatacccct
cttaagcccattccaaacaccccagttctgccctacgctccccttcgctgccgcatgtgc
cgctccatcctcaaccccttctccatcgttgattacattgccaagatttggatctgtccc
ttctgcttccagcgcaaccacttccccccacactactcatccatctctgaggacaacctc
cctgctgagctctttcctcagtacaccaccattgagtacgagtcaactcctgatgctggc
cctgctgtgcctccggtgttcctcttcgttgtagacacgtgcatgattgaggaggagatt
gggttcttgaaatcttcacttgcccaggctgtcgagttgttgcctgagaaatctcttgtt
gggttgatcacctttgggacctatgtgcaggttcatgagttaggatttgggcaggtgcca
aagtcatacgtgtttaaggggtcaaaggaggtgactaaggaacaaatcttggagcaaatg
tgctttttcacacgaaaaccaaagccaagtgtgggggtcattgctggcagtagggatgga
ctctccgcagagagcattgccagattcctcctgcctgcatctgaatgcgagtttgtctta
gattcacttctagaagagcttcagaaagatccttggcctgtcccatcagaccagcgtgca
tcgagatgcacaagcactgcattaagtattgcagctagtttattgggggtttgtgtacct
ggttcaggagcaaggattatggcctttgtcggtggcccatcaacagaaggacctggctct
attgtatcaaagaatttatctgagccaattcgttcacacaaagacctagaaaaaggttct
gcaccactctataataaagctgtcaagttctatgaggggctctcaaaacagcttgtacat
caaggacacgtattggatttgtttgcatgtgcactcgatcaggttggggtggcagaactc
aaagttgcagttgaaaggagtgggggaattgttgtgctcacagaaagttttggtcattct
gttttcaaggattcacttcgacacattttccagtcaagtgattatgaccttggtttatca
ttcaatggtatatttgaggttaactgctcgaaagatgtcaaagttcaaggcattctcggt
ccctgtgcttctttagagaagaaaggtcctctgtgttctgaaacggctgttggacaggga
aacacaagcgcctggaagttgtgtggtcttgacaaaaagacatcgttgtgcttggtattt
gacatagcaaggaaagatggcccagaagcaattggtcaacctacaagcaatcaattttac
ttccaatttttgacatattatcagcacaatgatggccatatgagattacgtacaactact
ctttccagaagatgggtggctggtcctggcagcatccaggatttgatagctgggtttgat
caagaagcagctgctgcagtcatggcacgcttagtttcttttaaaatggaaatggaggct
gattttgacccaataagatggcttgatcgatcattaattcgtttatgttcgaagtttgga
gattatcagaaggatagtccatcctcgtttagcctatccccacgtttatcaatatttccg
cagtttatgtttcatttaaggcgttctcagtttgtccaggtttttaataacagtccggat
gaaactgcatattacagaatgatcctcaatagagagaatgtagccaattcagttgtgatg
atccagccttcactgatatcttactcgttccagtcagaccctgagcctgctctccttgat
gtaactgcaattgctgctgataggatccttctattggattcctactttattgttgttgta
tttcatggagcaagcattgcccagtggcggaatgctggataccaaaatcaagctgaacat
cagccatttgctcaattgttgcaagccccacgcgatgatgctgatgcaatagccaaagag
cggtttcctgttcctcgtttggtcatatgcgaccaatacggctcccaggcccgtttcctc
ttggcgaaattgaacccttcagtcacatacaactccgataatcctccagcacctggtgga
gatgtcatattcacggatgatgttagctttcaggtcttcttggatcatctccaacgtcta
gcagttcagtaa
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