Phoenix dactylifera (date palm): 103712594
Help
Entry
103712594 CDS
T03274
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pda03009
]
103712594
Ribosome biogenesis [BR:
pda03009
]
Eukaryotic type
90S particles
Other 90S particles
103712594
Pre-60S particles
Other pre-60S particles
103712594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
103712594
NCBI-ProteinID:
XP_008797382
UniProt:
A0A8B7CE85
LinkDB
All DBs
Position
8:28790564..28807990
Genome browser
AA seq
1283 aa
AA seq
DB search
MEGLEMEGEMPFLPEDEAAGEDLAAGVLARFHSSIRDDHQHLCAAVGTMVQALKDQGIPL
TPVAYFGATASSLDRLSRDFASGSDPVATALLSFLSMALPSVPPAVLRSKGASVSDTLVR
ILGFGSLPEGGVKAGLKCVSHLLVVGDKGNWTSISTLYGVLIGFVTDHRPKVRKQSHVCL
RDVLQRFQGLSVLVSASERITAIFERFLLLAGGSNPTSSAAERERPRGAMEVLYILNALK
DCIPLMSMKSTNVILKYCKPLLDLRQSVVTSSILEILHSLCGSPTSEVAPEVLLDLLCSL
ALSITDKEKSADGMASAARLLNVGIKKVHQLNRQICIVKLPITFNALGEILASEYEEAIF
AATEALKGLIGYCLDENLVQQGVDQIKTSDGGTRKSGPTIIEKICAIIEGFLGYRYNAVW
DMSFQVLSTAFDQLGESSYYLMAGAVRSLADVQKLSDEDFPYRKQLHKCVGSALGALGPD
AFLCLLPLNLDAEDISDANVWLLPLLKHYIVGAHLGYFTEKILEIVRRLQQKSLKLEKEG
RVYSARSAEGLVYSLWSLLPAFCNFPVDTSSSFKILQKVLCRALRQEPSLRGIICSSLQI
LIQQNKDILSGNSVVSDDEISKPERKARDHYTLDAADKNLMAIRSFSLEFFSVLSEVFLT
SSKESGGCLQCAIHEFASISDEKVVKKFFMTTMHKLLKVTQEVIKMKQDNNSNSMQIDNS
SDEVSLSHSRALLLDLAAALLPGLGKQEIGLFFTAIKPAFQDEEGLIQKKAYKILSIMLK
ECEGFLSSNLDELLGLMIAALPSCHCSAKRHRLESLYFLIVRISKDPSEQKKRDIISSFL
TEILLALKEANRKTRNRAYDLLVEIGHACGDEDKGGQEENLLQFFNMIAGGLAGETPHMI
SATVKGLARLAYEFSDLITASYNLLPSAFLLLQRKNREIIKANLGLIKVLVAKSKVDRLQ
MHLREMVEGLLKWEDDTKTHFKAKVKLLIEMLVRKCGLDAVKAVMPEEHMKLLANIRKTR
ERKERKARSEADSESLHSRTTMSRQSRWNHTRIFSDFGDENGDDDSDAELGVASAFCDRR
TKAFSLQGSKAASLRSSQMRQATKSLPEDLFDHLEADPLDLLDRQKTRSALQSSTHLKRK
QASYDEPEIDPDGRLIVHEDGCRPKKEKSLPSDHDTDTRSYIGSRSMVSSSTRMQKKRRK
TTDTGRAYTGREYTNKKAGGDVKKKDKLEPYAYWPLDRKLLNRRAERKAAARKGMASVMK
FTKKLEGKSASGILSRKAMKLKK
NT seq
3852 nt
NT seq
+upstream
nt +downstream
nt
atggagggcctcgagatggagggcgagatgcccttcctcccggaagacgaagccgctgga
gaagatctcgccgccggcgtcctcgcccggttccacagctccatcagggacgaccaccag
cacctctgcgccgccgtcggcaccatggtccaggcgctgaaggatcagggcattcccctc
acgcccgttgcctacttcggcgccaccgcctcgtccctcgaccgcctctcccgtgacttc
gcctccggctccgaccccgtcgccaccgcgctgctctccttcctctccatggctctcccc
agtgttcctcccgctgtcctgaggagcaaaggagcctcggtttccgataccctggttcgg
attctagggtttgggtcgctgccggagggtggtgtgaaggctgggttgaagtgcgtctct
catctcctcgtggtcggagacaaggggaactggacgagcatttccactctctatggagtg
cttattgggtttgtcacggatcaccggccgaaggtcagaaagcagtctcatgtatgtctg
cgggatgtacttcaaaggttccaggggctgtcagttctggtgtcagcaagtgaaagaatc
acagccatttttgagaggtttcttctgcttgctggtggatctaatcctacgagttcagct
gcagagagagaaaggcccaggggagctatggaggtcctatatattttgaatgctttgaag
gactgtatccctctaatgtcaatgaagtctacaaatgttattctaaaatactgcaaacca
ttgttggatctgcggcagtcagttgttacaagtagtatattggagattttacactctctc
tgcggcagtccaacttcagaggttgctcctgaagtgttgctagatctgctgtgttcatta
gcattatccattactgataaggaaaaatcagcagatgggatggcatcagcagcacgcttg
ctcaatgttggtataaagaaggttcaccagctaaacaggcaaatatgcatcgtgaagctt
cctatcacatttaatgcccttggagagatcttagccagtgagtatgaggaagccatattt
gctgctacagaagctttaaagggtttgataggctattgccttgatgaaaacctggtccag
cagggtgttgatcaaatcaagactagtgatggagggacaagaaaatctggaccaacaatc
attgaaaagatttgtgccatcattgaaggcttccttggttatcgctataatgcagtctgg
gacatgtcttttcaagttctttcaacagcctttgatcaattaggggaatcttcatattat
ctgatggctggagcagttaggagccttgcagatgtacagaagttgtcggacgaagacttt
ccttacagaaagcagcttcacaaatgtgttggctcagcccttggtgccttgggacccgat
gcatttttatgccttttgcctctcaatctggatgctgaagatatatctgatgctaatgtt
tggttgcttcctttattgaagcattacatagttggtgcccatttaggatattttacagaa
aagattttggaaattgtcagaagactacagcagaaatccctgaagcttgaaaaggaggga
cgggtttattcagctaggagtgcagaaggccttgtatattcactgtggtctttgttgcct
gccttttgcaactttcctgttgatactagcagtagctttaaaattcttcagaaagtgtta
tgtcgtgcacttcgtcaagagcctagtctgcgtggcataatatgttccagcctgcagatt
ctgattcaacagaacaaggacatactatctggaaactctgtcgtgtctgatgatgagata
agcaaacctgaaagaaaagcaagagatcactatacacttgatgcagcggacaaaaatttg
atggcaatacggtcattttctttagagtttttctcagttttatctgaagtcttcttgaca
tcttcaaaagaaagtggtggatgcttgcagtgtgcgatccacgagtttgcttccatatca
gatgaaaaggtagtcaagaaattcttcatgactactatgcataagctgttgaaggtgact
caggaagtgattaaaatgaagcaagataacaattctaactcaatgcaaattgacaattca
tctgacgaagtgtcactctcacattcaagggccctcttattggacttggcagctgcactt
ctgccaggtctgggtaagcaagagattggtttatttttcactgctatcaagcctgcgttc
caggatgaagaagggttaatccaaaaaaaagcatataaaattctttcaatcatgctcaag
gaatgtgaaggatttctttcaagtaatctggatgaactacttgggttgatgatagcggca
ttgccttcttgtcattgttcagctaaacgccacagacttgagagtttatattttttgatt
gtccgtatttcaaaggatccatcagaacaaaagaagagggacattatcagctccttcctc
actgaaattttacttgctttaaaagaggctaacagaaaaacaagaaatagggcatatgac
ttgcttgttgaaattggccatgcatgcggagatgaggacaaaggcgggcaggaagaaaat
ctactacaattttttaacatgattgctggaggtcttgctggtgaaacaccacatatgatc
agtgctacagtaaaagggttggcacgcttggcgtatgagttctcagatctcatcactgca
tcttacaatttgctcccatctgcttttctcctcctgcaaagaaagaatcgtgagataatc
aaagctaatttaggtctcataaaggtactggttgccaaatctaaagtggacaggttgcaa
atgcacttgagggagatggttgaaggactattgaagtgggaagatgacaccaagactcat
tttaaagccaaggttaagttactcattgaaatgctggtgagaaaatgtggtttagatgct
gttaaggcagtgatgcctgaggaacatatgaaattgctggccaacattaggaagactagg
gagcggaaagaacgaaaagccagatctgaagcagattcagaatcacttcattcaagaacg
actatgtccaggcaaagtagatggaaccatactcgtattttctctgattttggagatgag
aatggggacgatgatagtgatgcagaacttggggtagccagtgctttttgtgaccgacgg
accaaggctttctctcttcaaggctcaaaagccgcttctttgaggtcaagccaaatgcgt
caagcaactaagagcttgccagaagatttgtttgaccatttagaggctgatccacttgac
ttgttagatcgacaaaagactagatcagccctccagtcatcaacacatctcaaaaggaaa
caagcatcttatgacgagccagagatagaccctgatggccgtcttattgttcatgaggat
ggttgcagacctaaaaaggagaagagccttccttcagatcatgacacggatacaagaagc
tatattggcagccgttcaatggtaagttcttcaacaagaatgcagaagaagcgtcggaaa
acaacagacaccgggcgggcttacacgggccgtgagtataccaataagaaggctggtggg
gatgtcaagaaaaaggataaacttgaaccatatgcatattggcctcttgatagaaagctg
cttaaccgtagggcagagcgcaaggcagccgctcgcaagggtatggcaagtgttatgaag
ttcacaaagaaactagaagggaagagtgcttctggtatactttctcgcaaggcaatgaag
ctcaaaaagtaa
DBGET
integrated database retrieval system
