Phoenix dactylifera (date palm): 103712743
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Entry
103712743 CDS
T03274
Name
(RefSeq) WD repeat and HMG-box DNA-binding protein 1
KO
K11274
chromosome transmission fidelity protein 4
Organism
pda
Phoenix dactylifera (date palm)
Brite
KEGG Orthology (KO) [BR:
pda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pda03036
]
103712743
Chromosome and associated proteins [BR:
pda03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
103712743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mcl1_mid
WD40_WDHD1_1st
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Ctf4_C
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_ELP1_1st
Beta-prop_SCAP
WD_LRWD1
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103712743
NCBI-ProteinID:
XP_008797576
UniProt:
A0A8B7CF15
LinkDB
All DBs
Position
1:14496361..14503941
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AA seq
1015 aa
AA seq
DB search
MKARSVRLREAHKSSGSASYCSILWDLDGRHLVTASASDTSVSIHDVSQPSKPAKALHDH
RAGVTALAFSANSSSLATGSIDHSVKLYSFPDGEFQSNVTRFTLPIRSLAFNKSGSLLAA
AGDDDGIKLIATLDSSISKVLKGHKGSVTGLAFDPTNEFLASVDAFGTVIYWELSSGIAV
HTLKAIAPNCDAENSLLNVLSWSPDGETLAVPGLRNDVVMYDRDTAEKLFTLKGDHERPV
CFLSWSPNGKYIATSGLDKQVLIWDVDLRQDIERQKFDDRICCLSWKPNGNALAVIDVMG
KFGIWEPAVPSCMKSPTDGALSLQAKNANGLLLFDEDDEKPSTSGSLDDAIEESHGESMP
LSRKRLRKQSVYDDNSNEDSDGEDGLMRQIESRKRSSMKHQEGVRGSKEDYVSSSKWAKS
KMQEAFQPGSTPAQTGKRRFLAYNMLGSITTIENEGYSHIEVDFHDTGRGPRVPSMTDYF
GFTMASLNENGSVFANPCKGEKNMSTLMYRPFSSWANNSEWSMRLEGEEVKAVALGTGWV
AAVTSFNFLRIFTEGGLQRHILCLNGPVVTAAGFNNLLAVVTHASGCLPSGGQMLEVKVF
DISEGTQPVGCHLPLTPCSYLTWFGFSEEGQLSAYDSKGVLRVFSNQHGGSWLPVFSASK
ARKSEDENYWMVGLNASKLFCIICKAPESFPSVMPKPVLTLLSLSFPLASSDLGADDLEN
EFMMSNLHLSQIQKKIEEFSAAGLDTSELDDDAFNTEAAIDRCILRLIASCCNSDKLVRA
TELVKLLSLEKSVKGAIKLVAALKLPMLAERFNSILEERLLKESKGTSLTTNGTITNHTS
LLRASPAPEITKVVETTSTSSSATMPQSHFSRHEKIEKANNMVGGMEPCKNPEGENAKIV
FNQMKSYQPINPFAKKPNNQEKVEEKRRRDMETCKDASIRNPKEGVNQAPSIVASRGISN
DGSNQKQSHGPVNPFAKASSNHEKSSLLDSIKKMKADHADEKVNNKKQKKKQEFK
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctcgatccgtgaggctcagggaggcgcacaagagcagcggctcggcttcctac
tgctcgatcctgtgggacctcgacggtcgccacctcgtcaccgcttccgcctccgatacc
tccgtctcgatccacgacgtctcccagccttcgaagcccgccaaagccctccacgaccac
agggctggggtcacggcactcgccttcagcgctaattccagctccctggccactggctcc
atcgatcactccgtcaagctctacagctttccagatggagagttccagagcaatgtcact
aggtttaccttgcccatccggtccctggcctttaacaaatcaggaagcttgttggctgct
gctggtgatgatgatggcatcaagttgattgctaccctggacagctcgatctcaaaggtg
ctcaagggccacaaagggtcggtcactggcttagccttcgatccaacaaatgagttcctg
gcatctgttgatgcatttggcactgtcatatattgggagctctcatcaggaatagcagta
catactctcaaagctatagcacctaattgcgatgcagaaaactcactactaaatgtactg
agctggagtcctgatggagaaaccttagctgttccaggtctgagaaatgatgttgtgatg
tatgacagagatacagctgagaaattgtttacactgaaaggagatcatgaacggcctgtc
tgctttctttcttggtctccgaatgggaagtacattgccacttctgggttagacaagcag
gttttgatctgggatgtggatctgaggcaggatattgaaaggcagaagtttgatgatagg
atatgttgtttgtcttggaagccaaatgggaatgctttagctgtaattgatgtcatgggt
aagtttggcatctgggagcctgctgttccttcatgcatgaagtcccctacagatggtgcc
cttagtttgcaagcaaaaaatgcaaatgggcttcttttatttgatgaagatgatgaaaaa
ccaagcacttccggaagtctagatgatgcaattgaagagagccatggtgagtcaatgcca
ctcagccgcaaaaggttaaggaaacagtcagtatatgatgacaactcgaatgaagatagt
gatggagaggatgggttgatgcgccaaattgaatcacgtaagagaagttctatgaaacac
caggagggtgtcagaggttccaaagaggactatgtgagctcatcaaagtgggcaaagtca
aaaatgcaggaggcttttcagccaggctccactcctgctcagactgggaagcgtcgattt
cttgcctacaacatgcttggaagtataactacaattgaaaatgaaggatattctcacatt
gaggttgattttcatgacactggaagaggtcctagggttccttccatgactgactacttt
ggttttacaatggcttcgttgaatgaaaatgggagtgtctttgcaaatccatgcaagggt
gaaaaaaacatgagtactctcatgtatcgcccttttagtagctgggctaataacagtgag
tggtcaatgcggcttgaaggagaggaagtgaaggctgtggcccttggtaccggttgggtg
gctgcagtcacaagttttaattttcttcgcatcttcacagagggtggcttgcagagacat
atcctctgtcttaatggtccagtggtgactgcagcaggttttaacaatttactggcagtt
gtcactcatgcttcaggctgtcttccctcaggaggtcagatgctagaagttaaagtattc
gatatatctgagggaacacaaccagttggatgccatcttcccttgactccatgttcttat
ttgacatggtttggctttagtgaagaaggccaactaagtgcatatgattccaagggagtg
ctgagagtgttctctaaccaacatgggggcagttggcttccagtcttcagtgctagcaaa
gcaagaaagtctgaagatgaaaactactggatggtgggcttaaatgcaagcaagttattc
tgtattatatgcaaggcccctgaatctttcccatcggtgatgcccaagcctgtgcttaca
ctactcagcctttcatttcctcttgcctcttctgaccttggtgctgatgatcttgaaaat
gagttcatgatgagcaacctgcatctctcacagatacagaagaaaattgaagaattttca
gcagcaggtctagatactagtgagcttgatgatgatgcctttaacacagaagctgctatt
gatcgctgcatcttgaggcttattgccagttgttgcaacagtgataaacttgtcagagcc
actgagcttgttaaattgttgtcattggagaagtcagtcaagggtgcaataaagcttgtc
gctgccctgaagcttcccatgttggcagagcggttcaacagtatactggaggaaagatta
ttaaaggaatccaaagggacgagtttaaccaccaatggtaccatcacaaaccacacatca
ctactaagggcttcaccagcacctgaaatcactaaagttgtagaaactacgagcacatca
tcgtcagcaacaatgcctcaatctcacttttcaaggcacgagaaaattgagaaggctaat
aatatggtgggagggatggaaccttgcaaaaacccagagggagaaaatgcaaagattgta
tttaatcagatgaaatcctatcagccaatcaacccatttgcaaagaaaccaaataaccag
gagaaagttgaagagaaaaggcgaagagacatggaaacctgcaaggatgcaagcatacgg
aatccaaaggaaggcgtcaatcaggcgccttccatagttgcaagcagagggatttcaaat
gatgggtccaatcaaaaacaatcacatgggcctgttaatccatttgcaaaagcatcaagc
aaccatgagaaatcatcacttctagattccatcaagaagatgaaggctgatcatgcggat
gaaaaagttaataacaaaaagcaaaaaaaaaagcaagagttcaaataa
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