| Entry |
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| Name |
(RefSeq) DExH-box ATP-dependent RNA helicase DExH10 isoform X1
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| KO |
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| Organism |
pda Phoenix dactylifera (date palm)
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pda00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103713132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:pda03019]
103713132
03041 Spliceosome [BR:pda03041]
103713132
03009 Ribosome biogenesis [BR:pda03009]
103713132
03016 Transfer RNA biogenesis [BR:pda03016]
103713132
Enzymes [BR:pda01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103713132
Messenger RNA biogenesis [BR:pda03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
103713132
Spliceosome [BR:pda03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103713132
Complex C
U4/U6.U5 tri-SnRNP related factors
103713132
Ribosome biogenesis [BR:pda03009]
Eukaryotic type
Pre-60S particles
Helicases
103713132
Transfer RNA biogenesis [BR:pda03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
103713132
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
9:complement(2150824..2166474)
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| AA seq |
1002 aa
MEEALIPGKRKVPEQDSEGKSAFINEAAKPKSVPKRRNLSRSCIHEVAVPNGYASSKDES
IHGTLSNPVYNGKMAKTYPFELDPFQRVSVACLERNESVLVSAHTSAGKTAVAEYAIAMS
FRDKQRVIYTSPLKALSNQKYRELSQEFSDVGLMTGDVTLAPNASCLVMTTEILRGMLYR
GSEVIKEVAWVIFDEIHYMKDRERGVVWEESIIFLPPAIKMVFLSATMSNATEFAEWICN
LHKQPCHVVYTDYRPTPLQHYLFPMGGSGLYLVVDENEQFKEENFMKMQDTFTKQKSHSD
GNRSGGAKAGGRIAKGGTASTGSDIYKIVKMIMERKFQPVIVFSFSRRECEQHAMSMSKL
DFNSQEEKDVVEQVFRNAVLCLNEEDRTLPAIELMLPLLQRGIAVHHSGLLPIIKELVEL
LFQEGLVKALFATETFAMGLNMPAKTVVFTSVKKWDGDSNRYIGSGEYIQMSGRAGRRGK
DERGICIIMIDEKMEMNALKDMVLGKPAPLVSTFRLSYYSILNLMSRAEGQFTAEHVIKN
SFHQFQYEKALPDMGLRISKLEKEAAMLDSSGETELAEYHKLGLDIAQLEKRIMSEITRP
ERVLLYLVPGRLVKVRDGGTDWGWGVVVNVVKKPPAASSTLPSSLASSRGLGYIVDTLLH
CSPGLSENGSRPKPCPPHPGEKGEMHVVPVPLPLISSLSSIRIAIPSDLRPPEARQTVLL
AVQELGKRYPQGLPKLHPVKDIGIKDPELVDLVHQVEELEQKLYSHPLHKSGQSEQQFQW
YQRKAEVNHEIQQLKSKMRESQLQKFRDELKNRSRVLKMLGHIDADGVLQLKGRAACLID
TGDELLVTELMFNGTFNDLDHHQVAALVSCFIPCDKSNEQIHLRNELAKPLQQLQDSARR
IAEIQRECKLDINVDEYVESTARPYLMDVIYCWSKGASFGEVIEMTDIFEGSIIRLARRL
DEFLNQLRAAAHAVGEVDLEKKFEAGSESLRRGIMFANSLYL |
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| NT seq |
3009 nt +upstreamnt +downstreamnt
atggaggaagctttgattcctggcaagcggaaagtgcctgagcaagattcagagggcaaa
tctgcattcatcaatgaggctgcaaagcctaaatcggttccaaaacgaagaaatctttcc
cgctcgtgcattcatgaagttgctgttcctaatggatatgcttcttccaaagatgaatcc
atccatggaaccctgtccaatccagtctataatggcaagatggccaaaacctacccgttt
gaattagaccccttccagcgtgtatcggtggcatgcctggaaaggaatgaatctgtctta
gtatcagcacacacttcagcggggaagactgcagttgctgagtatgctattgcaatgtca
tttagagacaagcagagagtcatttacacctcacctttgaaggctctgagcaatcagaag
tacagagagctcagtcaggagttctctgatgttggcctgatgactggtgatgtcaccctt
gcaccaaacgccagctgcttagtcatgacgacagaaattctcagagggatgctctacaga
ggttctgaggtgataaaggaagtagcttgggttatctttgatgaaattcactatatgaag
gatcgggagagaggggttgtttgggaagagagtataatattcttgccccctgcaattaag
atggtttttctctctgccaccatgtcgaatgccacagagtttgctgagtggatatgtaat
ctgcacaagcagccctgtcacgtggtgtatacagactacagacccacgccattgcaacat
tatttgtttccgatgggtgggtcgggtttgtacctcgttgtggatgagaacgagcagttt
aaagaggagaatttcatgaagatgcaggacacattcacaaagcaaaagagtcattcggat
gggaataggagtggtggtgccaaagccggtggtaggattgcaaagggtgggactgcttcc
acgggttctgacatctacaaaattgtaaagatgattatggaacgaaaatttcaaccggtg
attgttttcagctttagtagaagagagtgtgagcaacatgccatgtccatgtcaaagctt
gactttaattcccaagaagaaaaagatgttgttgaacaggttttccgaaatgctgtgctg
tgcttgaatgaagaagatagaactttgcctgcgatagagttgatgctgcctcttcttcaa
agaggtattgcagtgcaccattctggactacttccaataattaaggaattggtggagctt
ctgttccaggaaggcctagtaaaagcactttttgctactgaaacatttgctatgggtttg
aatatgccagcaaaaactgttgttttcacatctgtcaagaaatgggatggtgatagcaat
cggtacattggctctggagaatatatccagatgagtggaagagctggacgtcgtggcaaa
gatgaacgtggcatatgtattataatgattgatgagaagatggaaatgaatgctcttaag
gacatggttttaggtaaacctgctccattggtcagtactttcagactgagctattattca
attttgaatttgatgagccgtgccgagggccagtttactgctgaacatgtcatcaaaaat
tcattccaccaatttcagtatgagaaggcactgccagatatggggctaaggatctcaaag
ttggagaaagaggctgctatgcttgattcttccggagagaccgaacttgctgaatatcac
aagctgggacttgatatagctcaactagaaaagaggattatgtctgagatcaccagacct
gaacgggttctgctatatttggtccctggtaggctggttaaagtgcgagatggtggaaca
gattggggttggggagtggtggtaaatgtggtaaaaaagcctcctgcagcatcaagtaca
ttgccttcttcattggcctcttctcgtggtcttggttacattgtggatactctgctacac
tgctctcctggtttaagtgaaaatggttcacgtccaaagccatgcccacctcatcctggg
gaaaagggcgaaatgcatgtggttcctgtaccattgcccctaatttccagtctcagcagt
ataagaattgcaataccttctgacctccgaccacccgaagcaagacaaactgtacttctt
gcagtgcaagagttgggaaagcgttatccccaaggacttccaaaacttcatccggttaaa
gatataggtattaaagacccagagcttgttgatttggttcatcaagttgaagaactggag
caaaaattatattctcatccgttgcataagtctggtcaaagtgagcagcagttccaatgg
tatcagagaaaagcagaagtgaatcatgaaatccaacagctcaagtcgaagatgcgggag
tcacagttacaaaaatttcgcgatgaactgaaaaatcgttcgcgtgttctaaagatgctt
ggtcatattgatgctgatggggtattgcaattaaaaggacgtgcagcctgtttaatagat
acgggggacgaacttcttgtcactgagctgatgtttaatggtacatttaatgatcttgat
catcatcaagttgctgctcttgtgagctgctttatcccttgtgacaaatcaaatgaacaa
atacatctgagaaatgagcttgcgaaacctttacagcaacttcaggacagtgcaagaagg
attgctgagatacaacgtgaatgcaaattggacataaatgtggatgaatatgtggaatca
actgctagaccatacctcatggatgtgatttattgttggtcaaagggggcatcatttggt
gaggtaatcgaaatgactgatatttttgaaggcagcatcatacgccttgcaaggaggctg
gatgaattcttgaatcagttgcgtgctgctgctcatgccgttggagaggttgatctggag
aagaagtttgaagcaggcagtgagagccttcgacgaggtataatgtttgccaactccctg
tacttgtga |
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